PDB entry 1gg4

View 1gg4 on RCSB PDB site
Description: crystal structure of escherichia coli udpmurnac-tripeptide d-alanyl-d-alanine-adding enzyme (murf) at 2.3 angstrom resolution
Class: ligase
Keywords: alpha/beta sheet, LIGASE
Deposited on 2000-07-12, released 2000-12-20
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-07-21, with a file datestamp of 2021-07-16.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: udp-n-acetylmuramoylalanyl-d-glutamyl-2,6-diaminopimelate-d-alanyl-d-alanyl ligase
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P11880
      • modified residue (0)
      • modified residue (116)
      • modified residue (142)
      • modified residue (216)
      • modified residue (293)
      • modified residue (339)
      • modified residue (349)
      • modified residue (360)
      • modified residue (438)
    Domains in SCOPe 2.08: d1gg4a1, d1gg4a3, d1gg4a4
  • Chain 'B':
    Compound: udp-n-acetylmuramoylalanyl-d-glutamyl-2,6-diaminopimelate-d-alanyl-d-alanyl ligase
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P11880 (0-451)
      • modified residue (0)
      • modified residue (116)
      • modified residue (142)
      • modified residue (216)
      • modified residue (293)
      • modified residue (339)
      • modified residue (349)
      • modified residue (360)
      • modified residue (438)
    Domains in SCOPe 2.08: d1gg4b1, d1gg4b3, d1gg4b4
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1gg4A (A:)
misvtlsqltdilngelqgaditldavttdtrkltpgclfvalkgerfdahdfadqakag
gagallvsrpldidlpqlivkdtrlafgelaawvrqqvparvvaltgssgktsvkemtaa
ilsqcgntlytagnlnndigvpmtllrltpeydyavielganhqgeiawtvsltrpeaal
vnnlaaahlegfgslagvakakgeifsglpengiaimnadnndwlnwqsvigsrkvwrfs
pnaansdftatnihvtshgteftlqtptgsvdvllplpgrhnianalaaaalsmsvgatl
daikaglanlkavpgrlfpiqlaenqlllddsynanvgsmtaavqvlaempgyrvlvvgd
maelgaeseachvqvgeaakaagidrvlsvgkqshaistasgvgehfadktalitrlkll
iaeqqvitilvkgsrsaameevvralqengtc

    Sequence, based on observed residues (ATOM records): (download) 
    >1gg4A (A:)
misvtlsqltdilngelqgaditldavttdtrkltpgclfvalkgerfdahdfadqakag
gagallvsrpldidlpqlivkdtrlafgelaawvrqqvparvvaltgssgktsvkemtaa
ilsqcgntlytagnlnndigvpmtllrltpeydyavielganhqgeiawtvsltrpeaal
vnnlaslagvakakgeifsglpengiaimnadnndwlnwqsvigsrkvwrfspnaansdf
tatnihvtshgteftlqtptgsvdvllplpgrhnianalaaaalsmsvgatldaikagla
nlkavpgrlfpiqlaenqlllddsynanvgsmtaavqvlaempgyrvlvvgdmaelgaes
eachvqvgeaakaagidrvlsvgkqshaistasgvgehfadktalitrlklliaeqqvit
ilvkgsrsaameevvralq

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1gg4B (B:)
misvtlsqltdilngelqgaditldavttdtrkltpgclfvalkgerfdahdfadqakag
gagallvsrpldidlpqlivkdtrlafgelaawvrqqvparvvaltgssgktsvkemtaa
ilsqcgntlytagnlnndigvpmtllrltpeydyavielganhqgeiawtvsltrpeaal
vnnlaaahlegfgslagvakakgeifsglpengiaimnadnndwlnwqsvigsrkvwrfs
pnaansdftatnihvtshgteftlqtptgsvdvllplpgrhnianalaaaalsmsvgatl
daikaglanlkavpgrlfpiqlaenqlllddsynanvgsmtaavqvlaempgyrvlvvgd
maelgaeseachvqvgeaakaagidrvlsvgkqshaistasgvgehfadktalitrlkll
iaeqqvitilvkgsrsaameevvralqengtc

    Sequence, based on observed residues (ATOM records): (download) 
    >1gg4B (B:)
misvtlsqltdilngelqgaditldavttdtrkltpgclfvalkgerfdahdfadqakag
gagallvsrpldidlpqlivkdtrlafgelaawvrqqvparvvaltgssgktsvkemtaa
ilsqcgntlytagnlnndigvpmtllrltpeydyavielganhqgeiawtvsltrpeaal
vnnlaslagvakakgeifsglpengiaimnadnndwlnwqsvigsrkvwrfspnaansdf
tatnihvtshgteftlqtptgsvdvllplpgrhnianalaaaalsmsvgatldaikagla
nlkavpgrlfpiqlaenqlllddsynanvgsmtaavqvlaempgyrvlvvgdmaelgaes
eachvqvgeaakaagidrvlsvgkqshaistasgvgehfadktalitrlklliaeqqvit
ilvkgsrsaameevvralq