PDB entry 1gdg
View 1gdg on RCSB PDB site
Description: crystal structure of 2,3-dihydroxybiphenyl 1,2-dioxygenase in complex with 2,3-dhbp and no
Class: oxidoreductase
Keywords: beta-alpha-beta-beta-beta motif, BIPHENYL-2,3-DIOL 1,2-DIOXYGENASE, 2,3-DIHYDROXYBIPHENYL DIOXYGENASE,
BphC, NO, BIPHENYL-2,3-DIOL
Deposited on
2000-09-27, released
2001-09-27
The last revision prior to the SCOPe 2.08 freeze date was dated
2003-04-01, with a file datestamp of
2007-04-25.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.182
AEROSPACI score: 0.46
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: biphenyl-2,3-diol 1,2-dioxygenase
Species: Pseudomonas sp.
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1gdga3, d1gdga4 - Heterogens: FE2, BPY, NO, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1gdgA (A:)
msierlgylgfavkdvpawdhfltksvglmaagsagdaalyradqrawriavqpgelddl
ayaglevddaaalermadklrqagvaftrgdealmqqrkvmgllclqdpfglpleiyygp
aeifhepflpsapvsgfvtgdqgighfvrcvpdtakamafytevlgfvlsdiidiqmgpe
tsvpahflhcngrhhtialaafpipkrihhfmlqantiddvgyafdrldaagritsllgr
htndqtlsfyadtpspmievefgwgprtvdsswtvarhsrtamwghksvrgqr
Sequence, based on observed residues (ATOM records): (download)
>1gdgA (A:)
sierlgylgfavkdvpawdhfltksvglmaagsagdaalyradqrawriavqpgelddla
yaglevddaaalermadklrqagvaftrgdealmqqrkvmgllclqdpfglpleiyygpa
eifhepflpsapvsgfvtgdqgighfvrcvpdtakamafytevlgfvlsdiidiqmgpet
svpahflhcngrhhtialaafpipkrihhfmlqantiddvgyafdrldaagritsllgrh
tndqtlsfyadtpspmievefgwgprtvdsswtvarhsrtamwghksv