PDB entry 1gcx

View 1gcx on RCSB PDB site
Description: crystal structure of family b DNA polymerase from hyperthermophilic archaeon pyrococcus kodakaraensis kod1
Class: transferase
Keywords: transferase
Deposited on 2000-08-11, released 2001-02-28
The last revision prior to the SCOPe 2.08 freeze date was dated 2004-08-17, with a file datestamp of 2007-04-25.
Experiment type: XRAY
Resolution: 3 Å
R-factor: 0.231
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA polymerase
    Species: Pyrococcus kodakaraensis
    Database cross-references and differences (RAF-indexed):
    • GB BAA06142 (491-End)
    Domains in SCOPe 2.08: d1gcxa3, d1gcxa4

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1gcxA (A:)
mildtdyitedgkpvirifkkengefkieydrtfepyfyallkddsaieevkkitaerhg
tvvtvkrvekvqkkflgrpvevwklyfthpqdvpairdkirehpavidiyeydipfakry
lidkglvpmegdeelkmlafdietlyhegeefaegpilmisyadeegarvitwknvdlpy
vdvvsteremikrflrvvkekdpdvlityngdnfdfaylkkrceklginfalgrdgsepk
iqrmgdrfavevkgrihfdlypvirrtinlptytleavyeavfgqpkekvyaeeittawe
tgenlervarysmedakvtyelgkeflpmeaqlsrligqslwdvsrsstgnlvewfllrk
ayernelapnkpdekelarrrqsyeggyvkeperglwenivyldfrslypsiiithnvsp
dtlnregckeydvapqvghrfckdfpgfipsllgdlleerqkikkkmkatidpierklld
yrqraikilansyygyygyararwyckecaesvtawgreyitmtikeieekygfkviysd
tdgffatipgadaetvkkkameflkyinaklpgaleleyegfykrgffvtkkkyavidee
gkittrgleivrrdwseiaketqarvleallkdgdvekavrivkevteklskyevppekl
viheqitrdlkdykatgphvavakrlaargvkirpgtvisyivlkgsgrigdraipfdef
dptkhkydaeyyienqvlpaverilrafgyrkedlryqktrqvglsawlkpkgt

    Sequence, based on observed residues (ATOM records): (download) 
    >1gcxA (A:)
mildtdyitedgkpvirifkkengefkieydrtfepyfyallkddsaieevkkitaerhg
tvvtvkrvekvqkkflgrpvevwklyfthpqdvpairdkirehpavidiyeydipfakry
lidkglvpmegdeelkmlafdietlyhegeefaegpilmisyadeegarvitwknvdlpy
vdvvsteremikrflrvvkekdpdvlityngdnfdfaylkkrceklginfalgrdgsepk
iqrmgdrfavevkgrihfdlypvirrtinlptytleavyeavfgqpkekvyaeeittawe
tgenlervarysmedakvtyelgkeflpmeaqlsrligqslwdvsrsstgnlvewfllrk
ayernelapnkpdekelarrrqsyeggyvkeperglwenivyldfrslypsiiithnvsp
dtlnregckeydvapqvghrfckdfpgfipsllgdlleerqkikkkmkatidpierklld
yrqraikilansyygyygyararwyckecaesvtawgreyitmtikeieekygfkviysd
tdgffatipgadaetvkkkameflkyinaklpgaleleyegfykrgffvtkkkyavidee
gkittrgleivrrdwseiaketqarvleallkdgdvekavrivkevteklskyevppekl
viheqiphvavakrlaatvisyivlraipfdefdptkhkydaeyyienqvlpaverilrg
yrkedlryq