PDB entry 1g8q

View 1g8q on RCSB PDB site
Description: crystal structure of human cd81 extracellular domain, a receptor for hepatitis c virus
Class: immune system
Keywords: Alpha Helical, immune system
Deposited on 2000-11-20, released 2001-02-21
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-04-04, with a file datestamp of 2018-03-29.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: N/A
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: cd81 antigen, extracellular domain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P60033
      • conflict (89)
    Domains in SCOPe 2.08: d1g8qa_
  • Chain 'B':
    Compound: cd81 antigen, extracellular domain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P60033 (0-89)
      • conflict (89)
    Domains in SCOPe 2.08: d1g8qb_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1g8qA (A:)
fvnkdqiakdvkqfydqalqqavvdddannakavvktfhetldccgsstltalttsvlkn
nlcpsgsniisnlfkedchqkiddlfsgkh

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1g8qB (B:)
fvnkdqiakdvkqfydqalqqavvdddannakavvktfhetldccgsstltalttsvlkn
nlcpsgsniisnlfkedchqkiddlfsgkh

    Sequence, based on observed residues (ATOM records): (download) 
    >1g8qB (B:)
fvnkdqiakdvkqfydqalqqavvdnakavvktfhetldccgsstltalttsvlknnlcp
sgsniisnlfkedchqkiddlfsgkh