PDB entry 1g7y

View 1g7y on RCSB PDB site
Description: the crystal structure of the 58kd vegetative lectin from the tropical legume dolichos biflorus
Class: sugar binding protein
Keywords: jelly roll fold, lectin, sugar binding protein
Deposited on 2000-11-15, released 2000-11-29
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: stem/leaf lectin db58
    Species: Vigna unguiculata subsp. cylindrica [TaxId:3840]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1g7ya_
  • Chain 'B':
    Compound: stem/leaf lectin db58
    Species: Vigna unguiculata subsp. cylindrica [TaxId:3840]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1g7yb_
  • Chain 'C':
    Compound: stem/leaf lectin db58
    Species: Vigna unguiculata subsp. cylindrica [TaxId:3840]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1g7yc_
  • Chain 'D':
    Compound: stem/leaf lectin db58
    Species: Vigna unguiculata subsp. cylindrica [TaxId:3840]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1g7yd_
  • Chain 'E':
    Compound: stem/leaf lectin db58
    Species: Vigna unguiculata subsp. cylindrica [TaxId:3840]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1g7ye_
  • Chain 'F':
    Compound: stem/leaf lectin db58
    Species: Vigna unguiculata subsp. cylindrica [TaxId:3840]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1g7yf_
  • Heterogens: CA, MN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1g7yA (A:)
adiqsfsfknfnsssfilqgdatvsssklrltkvkgnglptlsslgrafysspiqiydks
tgavaswatsftanifapnksssadgiafalvpvgsepksnsgflgvfdsdvydnsaqtv
avefdtfsntdwdptsrhigidvnsiksirtaswglangqnaeilitynaatsllvaslv
hpsrrtsyivservditnelpeyvsigfsattglsegytethdvlswsfasklpddstte
pldiasylvrnvl

    Sequence, based on observed residues (ATOM records): (download) 
    >1g7yA (A:)
adiqsfsfknfnsssfilqgdatvsssklrltkvkgnglptlsslgrafysspiqiydks
tgavaswatsftanifapnksssadgiafalvpvgsepksnsgflgvfdsdvydnsaqtv
avefdtfsntdwdptsrhigidvnsiksirtaswglangqnaeilitynaatsllvaslv
hpsrrtsyivservditnelpeyvsigfsattglsegytethdvlswsfasklpddsepl
diasylvrnvl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1g7yB (B:)
adiqsfsfknfnsssfilqgdatvsssklrltkvkgnglptlsslgrafysspiqiydks
tgavaswatsftanifapnksssadgiafalvpvgsepksnsgflgvfdsdvydnsaqtv
avefdtfsntdwdptsrhigidvnsiksirtaswglangqnaeilitynaatsllvaslv
hpsrrtsyivservditnelpeyvsigfsattglsegytethdvlswsfasklpddstte
pldiasylvrnvl

    Sequence, based on observed residues (ATOM records): (download) 
    >1g7yB (B:)
adiqsfsfknfnsssfilqgdatvsssklrltkvkgnglptlsslgrafysspiqiydks
tgavaswatsftanifapnksssadgiafalvpvgsepksnsgflgvfdsdvydnsaqtv
avefdtfsntdwdptsrhigidvnsiksirtaswglangqnaeilitynaatsllvaslv
hpsrrtsyivservditnelpeyvsigfsattglsegytethdvlswsfasklpldiasy
lvrnvl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1g7yC (C:)
adiqsfsfknfnsssfilqgdatvsssklrltkvkgnglptlsslgrafysspiqiydks
tgavaswatsftanifapnksssadgiafalvpvgsepksnsgflgvfdsdvydnsaqtv
avefdtfsntdwdptsrhigidvnsiksirtaswglangqnaeilitynaatsllvaslv
hpsrrtsyivservditnelpeyvsigfsattglsegytethdvlswsfasklpddstte
pldiasylvrnvl

    Sequence, based on observed residues (ATOM records): (download) 
    >1g7yC (C:)
adiqsfsfknfnsssfilqgdatvsssklrltkvkgnglptlsslgrafysspiqiydks
tgavaswatsftanifapnksssadgiafalvpvgsepksnsgflgvfdsdvydnsaqtv
avefdtfsntdwdptsrhigidvnsiksirtaswglangqnaeilitynaatsllvaslv
hpsrrtsyivservditnelpeyvsigfsattglsegytethdvlswsfasklpddsepl
diasylvrnvl

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1g7yD (D:)
adiqsfsfknfnsssfilqgdatvsssklrltkvkgnglptlsslgrafysspiqiydks
tgavaswatsftanifapnksssadgiafalvpvgsepksnsgflgvfdsdvydnsaqtv
avefdtfsntdwdptsrhigidvnsiksirtaswglangqnaeilitynaatsllvaslv
hpsrrtsyivservditnelpeyvsigfsattglsegytethdvlswsfasklpddstte
pldiasylvrnvl

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >1g7yE (E:)
adiqsfsfknfnsssfilqgdatvsssklrltkvkgnglptlsslgrafysspiqiydks
tgavaswatsftanifapnksssadgiafalvpvgsepksnsgflgvfdsdvydnsaqtv
avefdtfsntdwdptsrhigidvnsiksirtaswglangqnaeilitynaatsllvaslv
hpsrrtsyivservditnelpeyvsigfsattglsegytethdvlswsfasklpddstte
pldiasylvrnvl

    Sequence, based on observed residues (ATOM records): (download) 
    >1g7yE (E:)
adiqsfsfknfnsssfilqgdatvsssklrltkvkgnglptlsslgrafysspiqiydks
tgavaswatsftanifapnksssadgiafalvpvgsepksnsgflgvfdsdvydnsaqtv
avefdtfsntdwdptsrhigidvnsiksirtaswglangqnaeilitynaatsllvaslv
hpsrrtsyivservditnelpeyvsigfsattglsegytethdvlswsfasklpddsldi
asylvrnvl

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >1g7yF (F:)
adiqsfsfknfnsssfilqgdatvsssklrltkvkgnglptlsslgrafysspiqiydks
tgavaswatsftanifapnksssadgiafalvpvgsepksnsgflgvfdsdvydnsaqtv
avefdtfsntdwdptsrhigidvnsiksirtaswglangqnaeilitynaatsllvaslv
hpsrrtsyivservditnelpeyvsigfsattglsegytethdvlswsfasklpddstte
pldiasylvrnvl

    Sequence, based on observed residues (ATOM records): (download) 
    >1g7yF (F:)
adiqsfsfknfnsssfilqgdatvsssklrltkvkgnglptlsslgrafysspiqiydks
tgavaswatsftanifapnksssadgiafalvpvgsepksnsgflgvfdsdvydnsaqtv
avefdtfsntdwdptsrhigidvnsiksirtaswglangqnaeilitynaatsllvaslv
hpsrrtsyivservditnelpeyvsigfsattglsegytethdvlswsfasklpldiasy
lvrnvl