PDB entry 1frf

View 1frf on RCSB PDB site
Description: crystal structure of the ni-fe hydrogenase from desulfovibrio fructosovorans
Class: oxidoreductase
Keywords: ni-fe hydrogenase, oxidoreductase
Deposited on 1998-07-21, released 1998-07-29
The last revision prior to the SCOPe 2.07 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.22
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'L':
    Compound: [ni-fe] hydrogenase
    Species: Desulfovibrio fructosovorans [TaxId:878]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P18188
      • conflict (352)
    Domains in SCOPe 2.07: d1frfl_
  • Chain 'S':
    Compound: [ni-fe] hydrogenase
    Species: Desulfovibrio fructosovorans [TaxId:878]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P18187 (Start-263)
      • conflict (61)
      • conflict (97)
      • insertion (111)
      • conflict (112-114)
      • conflict (116)
    Domains in SCOPe 2.07: d1frfs_
  • Heterogens: FE, NI, MG, SF4, F3S, HOH

PDB Chain Sequences:

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >1frfL (L:)
maeskptpqstftgpivvdpitrieghlrimvevengkvkdawsssqlfrgleiilkgrd
prdaqhftqracgvctyvhalassrcvddavkvsipanarmmrnlvmasqylhdhlvhfy
hlhaldwvdvtaalkadpnkaaklaasidtartgnsekalkavqdklkafvesgqlgift
nayflgghkayylppevnliatahylealhmqvkaasamailggknphtqftvvggcsny
qgltkdplanylalskevcqfvnecyipdllavagfykdwggiggtsnylafgefatdds
spekhlatsqfpsgvitgrdlgkvdnvdlgaiyedvkyswyapggdgkhpydgvtdpkyt
klddkdhyswmkaprykgkamevgplartfiayakgqpdfkkvvdmvlgklsvpatalhs
tlgrtaargietaivcanmekwikemadsgakdntlcakwempeeskgvgladaprgsls
hwirikgkkidnfqlvvpstwnlgprgpqgdkspveealigtpiadpkrpveilrtvhaf
dpciacgvhviepetneilkfkvc

    Sequence, based on observed residues (ATOM records): (download) 
    >1frfL (L:)
tpqstftgpivvdpitrieghlrimvevengkvkdawsssqlfrgleiilkgrdprdaqh
ftqracgvctyvhalassrcvddavkvsipanarmmrnlvmasqylhdhlvhfyhlhald
wvdvtaalkadpnkaaklaasidtartgnsekalkavqdklkafvesgqlgiftnayflg
ghkayylppevnliatahylealhmqvkaasamailggknphtqftvvggcsnyqgltkd
planylalskevcqfvnecyipdllavagfykdwggiggtsnylafgefatddsspekhl
atsqfpsgvitgrdlgkvdnvdlgaiyedvkyswyapggdgkhpydgvtdpkytklddkd
hyswmkaprykgkamevgplartfiayakgqpdfkkvvdmvlgklsvpatalhstlgrta
argietaivcanmekwikemadsgakdntlcakwempeeskgvgladaprgslshwirik
gkkidnfqlvvpstwnlgprgpqgdkspveealigtpiadpkrpveilrtvhafdpciac
gvh

  • Chain 'S':
    Sequence, based on SEQRES records: (download) 
    >1frfS (S:)
ltakhrpsvvwlhnaectgcteaairtikpyidalildtisldyqetimaaagetseaal
healegkdgyylvvegglptidggqwgmvaghpmietckkaaakakgiicigtcspyggv
qkakpnpsqakgvsealgvktinipgcppnpinfvgavvhvltkgipdldengrpklfyg
elvhdncprlphfeasefapsfdseeakkgfclyelgckgpvtynncpkvlfnqvnwpvq
aghpclgcsepdfwdtmtpfyeqg

    Sequence, based on observed residues (ATOM records): (download) 
    >1frfS (S:)
khrpsvvwlhnaectgcteaairtikpyidalildtisldyqetimaaagetseaalhea
legkdgyylvvegglptidggqwgmvaghpmietckkaaakakgiicigtcspyggvqka
kpnpsqakgvsealgvktinipgcppnpinfvgavvhvltkgipdldengrpklfygelv
hdncprlphfeasefapsfdseeakkgfclyelgckgpvtynncpkvlfnqvnwpvqagh
pclgcsepdfwdtmtpfyeqg