PDB entry 1fo0
View 1fo0 on RCSB PDB site
Description: murine alloreactive scfv tcr-peptide-MHC class I molecule complex
Class: immune system
Keywords: t cell receptor, class I MHC, h-2kb, tcr-pmhc complex, immune system
Deposited on
2000-08-24, released
2000-10-02
The last revision prior to the SCOPe 2.06 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.218
AEROSPACI score: 0.27
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: protein (bm3.3 t cell receptor alpha-chain)
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- GB AAA40182 (Start-115)
- conflict (26)
- insertion (94-95)
- insertion (98-99)
- conflict (100-101)
- conflict (103-104)
- conflict (107)
- conflict (110)
- conflict (112-113)
Domains in SCOPe 2.06: d1fo0a_ - Chain 'B':
Compound: protein (bm3.3 t cell receptor beta-chain)
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- GB AAA40254 (0-107)
- conflict (94-97)
- conflict (101)
- conflict (105)
- conflict (107)
- conflict (110-111)
Domains in SCOPe 2.06: d1fo0b_ - Chain 'H':
Compound: protein (allogeneic h-2kb MHC class I molecule)
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d1fo0h1, d1fo0h2 - Chain 'L':
Compound: protein (beta-2 microglobulin)
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d1fo0l_ - Chain 'P':
Compound: naturally processed octapeptide pbm1
Species: synthetic, synthetic
Database cross-references and differences (RAF-indexed):
- Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1fo0A (A:)
qkvtqtqtsisvmekttvtmdcvyetqdssyflfwykqtasgeivflirqdsykkenatv
ghyslnfqkpkssigliitatqiedsavyfcamrgdyggsgnklifgtgtllsvkp
Sequence, based on observed residues (ATOM records): (download)
>1fo0A (A:)
kvtqtqtsisvmekttvtmdcvyetqdssyflfwykqtasgeivflirqdsykkenatvg
hyslnfqkpkssigliitatqiedsavyfcamrgdyggsgnklifgtgtllsvkp
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1fo0B (B:)
vtlleqnprwrlvprgqavnlrcilknsqypwmswyqqdlqkqlqwlftlrspgdkevks
lpgadylatrvtdtelrlqvanmsqgrtlyctcsadrvgntlyfgegsrliv
- Chain 'H':
Sequence; same for both SEQRES and ATOM records: (download)
>1fo0H (H:)
mgphslryfvtavsrpglgeprymevgyvddtefvrfdsdaenpryeprarwmeqegpey
weretqkakgneqsfrvdlrtllgyynqskggshtiqvisgcevgsdgrllrgyqqyayd
gcdyialnedlktwtaadmaalitkhkweqageaerlraylegtcvewlrrylkngnatl
lrtdspkahvthhsrpedkvtlrcwalgfypaditltwqlngeeliqdmelvetrpagdg
tfqkwasvvvplgkeqyytchvyhqglpepltlrwe
- Chain 'L':
Sequence; same for both SEQRES and ATOM records: (download)
>1fo0L (L:)
iqktpqiqvysrhppengkpnilncyvtqfhpphieiqmlkngkkipkvemsdmsfskdw
sfyilahteftptetdtyacrvkhdsmaepktvywdrdm
- Chain 'P':
No sequence available.