PDB entry 1f4m

View 1f4m on RCSB PDB site
Description: p3(2) crystal structure of ala2ile2-6, a version of rop with a repacked hydrophobic core and a new fold.
Class: transcription
Keywords: Rop, dimer, homodimer, helix-turn-helix, transcription regulation, hydrophobic core packing, thermodynamic stability
Deposited on 2000-06-08, released 2001-01-10
The last revision prior to the SCOP 1.75 freeze date was dated 2001-01-10, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.25 Å
R-factor: 0.233
AEROSPACI score: -1.61 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: rop ala2ile2-6
    Species: Escherichia coli
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03051 (0-End)
      • engineered (0)
      • engineered (7)
      • engineered (18)
      • engineered (21)
      • engineered (25)
      • engineered (33)
      • engineered (37)
      • engineered (40)
      • engineered (47)
      • engineered (51)
    Domains in SCOP 1.75: d1f4ma_
  • Chain 'B':
    Compound: rop ala2ile2-6
    Species: Escherichia coli
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03051
      • engineered (7)
      • engineered (18)
      • engineered (21)
      • engineered (25)
      • engineered (33)
      • engineered (37)
      • engineered (40)
      • engineered (47)
      • engineered (51)
    Domains in SCOP 1.75: d1f4mb_
  • Chain 'C':
    Compound: rop ala2ile2-6
    Species: Escherichia coli
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03051
      • engineered (7)
      • engineered (18)
      • engineered (21)
      • engineered (25)
      • engineered (33)
      • engineered (37)
      • engineered (40)
      • engineered (47)
      • engineered (51)
    Domains in SCOP 1.75: d1f4mc_
  • Chain 'D':
    Compound: rop ala2ile2-6
    Species: Escherichia coli
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03051 (0-End)
      • engineered (0)
      • engineered (7)
      • engineered (18)
      • engineered (21)
      • engineered (25)
      • engineered (33)
      • engineered (37)
      • engineered (40)
      • engineered (47)
      • engineered (51)
    Domains in SCOP 1.75: d1f4md_
  • Chain 'E':
    Compound: rop ala2ile2-6
    Species: Escherichia coli
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03051
      • engineered (7)
      • engineered (18)
      • engineered (21)
      • engineered (25)
      • engineered (33)
      • engineered (37)
      • engineered (40)
      • engineered (47)
      • engineered (51)
    Domains in SCOP 1.75: d1f4me_
  • Chain 'F':
    Compound: rop ala2ile2-6
    Species: Escherichia coli
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03051
      • engineered (7)
      • engineered (18)
      • engineered (21)
      • engineered (25)
      • engineered (33)
      • engineered (37)
      • engineered (40)
      • engineered (47)
      • engineered (51)
    Domains in SCOP 1.75: d1f4mf_
  • Heterogens: CA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1f4mA (A:)
    gtkqektilnmarfirsqaltilekaneldadeiadiaesihdhadeiyrsalarfgddg
    enl
    

    Sequence, based on observed residues (ATOM records): (download)
    >1f4mA (A:)
    gtkqektilnmarfirsqaltilekaneldadeiadiaesihdhadeiyrsalarf
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >1f4mB (B:)
    gtkqektilnmarfirsqaltilekaneldadeiadiaesihdhadeiyrsalarfgddg
    enl
    

    Sequence, based on observed residues (ATOM records): (download)
    >1f4mB (B:)
    tkqektilnmarfirsqaltilekaneldadeiadiaesihdhadeiyrsalarfg
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >1f4mC (C:)
    gtkqektilnmarfirsqaltilekaneldadeiadiaesihdhadeiyrsalarfgddg
    enl
    

    Sequence, based on observed residues (ATOM records): (download)
    >1f4mC (C:)
    tkqektilnmarfirsqaltilekaneldadeiadiaesihdhadeiyrsalar
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >1f4mD (D:)
    gtkqektilnmarfirsqaltilekaneldadeiadiaesihdhadeiyrsalarfgddg
    enl
    

    Sequence, based on observed residues (ATOM records): (download)
    >1f4mD (D:)
    gtkqektilnmarfirsqaltilekaneldadeiadiaesihdhadeiyrsalarfg
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >1f4mE (E:)
    gtkqektilnmarfirsqaltilekaneldadeiadiaesihdhadeiyrsalarfgddg
    enl
    

    Sequence, based on observed residues (ATOM records): (download)
    >1f4mE (E:)
    ektilnmarfirsqaltilekaneldadeiadiaesihdhadeiyrsalarfg
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >1f4mF (F:)
    gtkqektilnmarfirsqaltilekaneldadeiadiaesihdhadeiyrsalarfgddg
    enl
    

    Sequence, based on observed residues (ATOM records): (download)
    >1f4mF (F:)
    qektilnmarfirsqaltilekaneldadeiadiaesihdhadeiyrsalarfg