PDB entry 1f33

View 1f33 on RCSB PDB site
Description: the structural basis for DNA protection by e. coli dps protein
Class: DNA binding protein
Keywords: Dodecamer, DNA BINDING PROTEIN
Deposited on 2000-05-31, released 2003-06-17
The last revision prior to the SCOPe 2.07 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.209
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA protection during starvation protein
    Species: Escherichia coli [TaxId:562]
    Gene: dps
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1f33a_
  • Chain 'B':
    Compound: DNA protection during starvation protein
    Species: Escherichia coli [TaxId:562]
    Gene: dps
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1f33b_
  • Chain 'C':
    Compound: DNA protection during starvation protein
    Species: Escherichia coli [TaxId:562]
    Gene: dps
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1f33c_
  • Chain 'D':
    Compound: DNA protection during starvation protein
    Species: Escherichia coli [TaxId:562]
    Gene: dps
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1f33d_
  • Chain 'E':
    Compound: DNA protection during starvation protein
    Species: Escherichia coli [TaxId:562]
    Gene: dps
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1f33e_
  • Chain 'F':
    Compound: DNA protection during starvation protein
    Species: Escherichia coli [TaxId:562]
    Gene: dps
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1f33f_
  • Chain 'G':
    Compound: DNA protection during starvation protein
    Species: Escherichia coli [TaxId:562]
    Gene: dps
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1f33g_
  • Chain 'H':
    Compound: DNA protection during starvation protein
    Species: Escherichia coli [TaxId:562]
    Gene: dps
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1f33h_
  • Chain 'I':
    Compound: DNA protection during starvation protein
    Species: Escherichia coli [TaxId:562]
    Gene: dps
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1f33i_
  • Chain 'J':
    Compound: DNA protection during starvation protein
    Species: Escherichia coli [TaxId:562]
    Gene: dps
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1f33j_
  • Chain 'K':
    Compound: DNA protection during starvation protein
    Species: Escherichia coli [TaxId:562]
    Gene: dps
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1f33k_
  • Chain 'L':
    Compound: DNA protection during starvation protein
    Species: Escherichia coli [TaxId:562]
    Gene: dps
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1f33l_
  • Heterogens: TRS, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1f33A (A:)
    mstaklvkskatnllytrndvsdsekkatvellnrqviqfidlslitkqahwnmrganfi
    avhemldgfrtalidhldtmaeravqlggvalgttqvinsktplksypldihnvqdhlke
    ladryaivandvrkaigeakdddtadiltaasrdldkflwfiesnie
    

    Sequence, based on observed residues (ATOM records): (download)
    >1f33A (A:)
    tnllytrndvsdsekkatvellnrqviqfidlslitkqahwnmrganfiavhemldgfrt
    alidhldtmaeravqlggvalgttqvinsktplksypldihnvqdhlkeladryaivand
    vrkaigeakdddtadiltaasrdldkflwfiesnie
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >1f33B (B:)
    mstaklvkskatnllytrndvsdsekkatvellnrqviqfidlslitkqahwnmrganfi
    avhemldgfrtalidhldtmaeravqlggvalgttqvinsktplksypldihnvqdhlke
    ladryaivandvrkaigeakdddtadiltaasrdldkflwfiesnie
    

    Sequence, based on observed residues (ATOM records): (download)
    >1f33B (B:)
    tnllytrndvsdsekkatvellnrqviqfidlslitkqahwnmrganfiavhemldgfrt
    alidhldtmaeravqlggvalgttqvinsktplksypldihnvqdhlkeladryaivand
    vrkaigeakdddtadiltaasrdldkflwfiesnie
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >1f33C (C:)
    mstaklvkskatnllytrndvsdsekkatvellnrqviqfidlslitkqahwnmrganfi
    avhemldgfrtalidhldtmaeravqlggvalgttqvinsktplksypldihnvqdhlke
    ladryaivandvrkaigeakdddtadiltaasrdldkflwfiesnie
    

    Sequence, based on observed residues (ATOM records): (download)
    >1f33C (C:)
    tnllytrndvsdsekkatvellnrqviqfidlslitkqahwnmrganfiavhemldgfrt
    alidhldtmaeravqlggvalgttqvinsktplksypldihnvqdhlkeladryaivand
    vrkaigeakdddtadiltaasrdldkflwfiesnie
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >1f33D (D:)
    mstaklvkskatnllytrndvsdsekkatvellnrqviqfidlslitkqahwnmrganfi
    avhemldgfrtalidhldtmaeravqlggvalgttqvinsktplksypldihnvqdhlke
    ladryaivandvrkaigeakdddtadiltaasrdldkflwfiesnie
    

    Sequence, based on observed residues (ATOM records): (download)
    >1f33D (D:)
    tnllytrndvsdsekkatvellnrqviqfidlslitkqahwnmrganfiavhemldgfrt
    alidhldtmaeravqlggvalgttqvinsktplksypldihnvqdhlkeladryaivand
    vrkaigeakdddtadiltaasrdldkflwfiesnie
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >1f33E (E:)
    mstaklvkskatnllytrndvsdsekkatvellnrqviqfidlslitkqahwnmrganfi
    avhemldgfrtalidhldtmaeravqlggvalgttqvinsktplksypldihnvqdhlke
    ladryaivandvrkaigeakdddtadiltaasrdldkflwfiesnie
    

    Sequence, based on observed residues (ATOM records): (download)
    >1f33E (E:)
    tnllytrndvsdsekkatvellnrqviqfidlslitkqahwnmrganfiavhemldgfrt
    alidhldtmaeravqlggvalgttqvinsktplksypldihnvqdhlkeladryaivand
    vrkaigeakdddtadiltaasrdldkflwfiesnie
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >1f33F (F:)
    mstaklvkskatnllytrndvsdsekkatvellnrqviqfidlslitkqahwnmrganfi
    avhemldgfrtalidhldtmaeravqlggvalgttqvinsktplksypldihnvqdhlke
    ladryaivandvrkaigeakdddtadiltaasrdldkflwfiesnie
    

    Sequence, based on observed residues (ATOM records): (download)
    >1f33F (F:)
    skatnllytrndvsdsekkatvellnrqviqfidlslitkqahwnmrganfiavhemldg
    frtalidhldtmaeravqlggvalgttqvinsktplksypldihnvqdhlkeladryaiv
    andvrkaigeakdddtadiltaasrdldkflwfiesnie
    

  • Chain 'G':
    Sequence, based on SEQRES records: (download)
    >1f33G (G:)
    mstaklvkskatnllytrndvsdsekkatvellnrqviqfidlslitkqahwnmrganfi
    avhemldgfrtalidhldtmaeravqlggvalgttqvinsktplksypldihnvqdhlke
    ladryaivandvrkaigeakdddtadiltaasrdldkflwfiesnie
    

    Sequence, based on observed residues (ATOM records): (download)
    >1f33G (G:)
    tnllytrndvsdsekkatvellnrqviqfidlslitkqahwnmrganfiavhemldgfrt
    alidhldtmaeravqlggvalgttqvinsktplksypldihnvqdhlkeladryaivand
    vrkaigeakdddtadiltaasrdldkflwfiesnie
    

  • Chain 'H':
    Sequence, based on SEQRES records: (download)
    >1f33H (H:)
    mstaklvkskatnllytrndvsdsekkatvellnrqviqfidlslitkqahwnmrganfi
    avhemldgfrtalidhldtmaeravqlggvalgttqvinsktplksypldihnvqdhlke
    ladryaivandvrkaigeakdddtadiltaasrdldkflwfiesnie
    

    Sequence, based on observed residues (ATOM records): (download)
    >1f33H (H:)
    tnllytrndvsdsekkatvellnrqviqfidlslitkqahwnmrganfiavhemldgfrt
    alidhldtmaeravqlggvalgttqvinsktplksypldihnvqdhlkeladryaivand
    vrkaigeakdddtadiltaasrdldkflwfiesnie
    

  • Chain 'I':
    Sequence, based on SEQRES records: (download)
    >1f33I (I:)
    mstaklvkskatnllytrndvsdsekkatvellnrqviqfidlslitkqahwnmrganfi
    avhemldgfrtalidhldtmaeravqlggvalgttqvinsktplksypldihnvqdhlke
    ladryaivandvrkaigeakdddtadiltaasrdldkflwfiesnie
    

    Sequence, based on observed residues (ATOM records): (download)
    >1f33I (I:)
    skatnllytrndvsdsekkatvellnrqviqfidlslitkqahwnmrganfiavhemldg
    frtalidhldtmaeravqlggvalgttqvinsktplksypldihnvqdhlkeladryaiv
    andvrkaigeakdddtadiltaasrdldkflwfiesnie
    

  • Chain 'J':
    Sequence, based on SEQRES records: (download)
    >1f33J (J:)
    mstaklvkskatnllytrndvsdsekkatvellnrqviqfidlslitkqahwnmrganfi
    avhemldgfrtalidhldtmaeravqlggvalgttqvinsktplksypldihnvqdhlke
    ladryaivandvrkaigeakdddtadiltaasrdldkflwfiesnie
    

    Sequence, based on observed residues (ATOM records): (download)
    >1f33J (J:)
    tnllytrndvsdsekkatvellnrqviqfidlslitkqahwnmrganfiavhemldgfrt
    alidhldtmaeravqlggvalgttqvinsktplksypldihnvqdhlkeladryaivand
    vrkaigeakdddtadiltaasrdldkflwfiesnie
    

  • Chain 'K':
    Sequence, based on SEQRES records: (download)
    >1f33K (K:)
    mstaklvkskatnllytrndvsdsekkatvellnrqviqfidlslitkqahwnmrganfi
    avhemldgfrtalidhldtmaeravqlggvalgttqvinsktplksypldihnvqdhlke
    ladryaivandvrkaigeakdddtadiltaasrdldkflwfiesnie
    

    Sequence, based on observed residues (ATOM records): (download)
    >1f33K (K:)
    tnllytrndvsdsekkatvellnrqviqfidlslitkqahwnmrganfiavhemldgfrt
    alidhldtmaeravqlggvalgttqvinsktplksypldihnvqdhlkeladryaivand
    vrkaigeakdddtadiltaasrdldkflwfiesnie
    

  • Chain 'L':
    Sequence, based on SEQRES records: (download)
    >1f33L (L:)
    mstaklvkskatnllytrndvsdsekkatvellnrqviqfidlslitkqahwnmrganfi
    avhemldgfrtalidhldtmaeravqlggvalgttqvinsktplksypldihnvqdhlke
    ladryaivandvrkaigeakdddtadiltaasrdldkflwfiesnie
    

    Sequence, based on observed residues (ATOM records): (download)
    >1f33L (L:)
    tnllytrndvsdsekkatvellnrqviqfidlslitkqahwnmrganfiavhemldgfrt
    alidhldtmaeravqlggvalgttqvinsktplksypldihnvqdhlkeladryaivand
    vrkaigeakdddtadiltaasrdldkflwfiesnie