PDB entry 1f1m

View 1f1m on RCSB PDB site
Description: crystal structure of outer surface protein c (ospc)
Class: immune system
Keywords: lyme disease, ospc, hb19, helical bundle, dimer, immune system
Deposited on 2000-05-19, released 2001-04-04
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-10-04, with a file datestamp of 2017-09-29.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: N/A
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: outer surface protein c
    Species: Borrelia burgdorferi [TaxId:139]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9AGB1 (Start-163)
      • conflict (44)
      • engineered (59)
    Domains in SCOPe 2.08: d1f1ma_
  • Chain 'B':
    Compound: outer surface protein c
    Species: Borrelia burgdorferi [TaxId:139]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9AGB1 (Start-163)
      • conflict (44)
      • engineered (59)
    Domains in SCOPe 2.08: d1f1mb_
  • Chain 'C':
    Compound: outer surface protein c
    Species: Borrelia burgdorferi [TaxId:139]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9AGB1 (Start-163)
      • conflict (44)
      • engineered (59)
    Domains in SCOPe 2.08: d1f1mc_
  • Chain 'D':
    Compound: outer surface protein c
    Species: Borrelia burgdorferi [TaxId:139]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9AGB1 (Start-163)
      • conflict (44)
      • engineered (59)
    Domains in SCOPe 2.08: d1f1md_
  • Heterogens: ZN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1f1mA (A:)
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    Sequence, based on observed residues (ATOM records): (download) 
    >1f1mA (A:)
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lktnndktkgadeleklfesvknlskaakemltnsvkeltsp

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1f1mB (B:)
kgpnlteiskkitesnavvlavkevetlltsidelakaigkkiksdvsldneadhngslm
sgaylistlitkkisaikdsgelkaeiekakkcseeftaklkgehtdlgkegvtddnakk
ailktnndktkgadeleklfesvknlskaakemltnsvkeltsp

    Sequence, based on observed residues (ATOM records): (download) 
    >1f1mB (B:)
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aylistlitkkisaikdsgelkaeiekakkcseeftaklkgehtdlgkegvtddnakkai
lktnndktkgadeleklfesvknlskaakemltnsvkeltsp

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1f1mC (C:)
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sgaylistlitkkisaikdsgelkaeiekakkcseeftaklkgehtdlgkegvtddnakk
ailktnndktkgadeleklfesvknlskaakemltnsvkeltsp

    Sequence, based on observed residues (ATOM records): (download) 
    >1f1mC (C:)
pnlteiskkitesnavvlavkevetlltsidelakaigkkiksdvsldneadhngslmsg
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lktnndktkgadeleklfesvknlskaakemltnsvkeltsp

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1f1mD (D:)
kgpnlteiskkitesnavvlavkevetlltsidelakaigkkiksdvsldneadhngslm
sgaylistlitkkisaikdsgelkaeiekakkcseeftaklkgehtdlgkegvtddnakk
ailktnndktkgadeleklfesvknlskaakemltnsvkeltsp

    Sequence, based on observed residues (ATOM records): (download) 
    >1f1mD (D:)
pnlteiskkitesnavvlavkevetlltsidelakaigkkiksdvsldneadhngslmsg
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lktnndktkgadeleklfesvknlskaakemltnsvkeltsp