PDB entry 1ep6

View 1ep6 on RCSB PDB site
Description: crystal structure of the conserved core domain of venezualan equine encephalitis capsid protein
Class: hydrolase
Keywords: beta barrel, hydrolase
Deposited on 2000-03-27, released 2003-07-08
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.45 Å
R-factor: 0.216
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: capsid protein c
    Species: Venezuelan equine encephalitis virus [TaxId:11036]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1ep6a_
  • Chain 'B':
    Compound: capsid protein c
    Species: Venezuelan equine encephalitis virus [TaxId:11036]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1ep6b_
  • Chain 'C':
    Compound: capsid protein c
    Species: Venezuelan equine encephalitis virus [TaxId:11036]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1ep6c_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1ep6A (A:)
    vmklesdktfpimlegkingyacvvggklfrpmhvegkidndvlaalktkkaskydleya
    dvpqnmradtfkythekpqgyyswhhgavqyengrftvpkgvgakgdsgrpildnqgrvv
    aivlggvnegsrtalsvvmwnekgvtvkytpenceqw
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1ep6B (B:)
    vmklesdktfpimlegkingyacvvggklfrpmhvegkidndvlaalktkkaskydleya
    dvpqnmradtfkythekpqgyyswhhgavqyengrftvpkgvgakgdsgrpildnqgrvv
    aivlggvnegsrtalsvvmwnekgvtvkytpenceqw
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >1ep6C (C:)
    vmklesdktfpimlegkingyacvvggklfrpmhvegkidndvlaalktkkaskydleya
    dvpqnmradtfkythekpqgyyswhhgavqyengrftvpkgvgakgdsgrpildnqgrvv
    aivlggvnegsrtalsvvmwnekgvtvkytpenceqw
    

    Sequence, based on observed residues (ATOM records): (download)
    >1ep6C (C:)
    esdktfpimlegkingyacvvggklfrpmhvegkidndvlaalktkkaskydleyadvpq
    nmradtfkythekpqgyyswhhgavqyengrftvpkgvgakgdsgrpildnqgrvvaivl
    ggvnegsrtalsvvmwnekgvtvkytpenceqw