PDB entry 1eo8

View 1eo8 on RCSB PDB site
Description: influenza virus hemagglutinin complexed with a neutralizing antibody
Class: Viral protein/Immune system
Keywords: COMPLEX (HEMAGGLUTININ-IMMMUNOGLOBULIN), HEMAGGLUTININ, IMMUNOGLOBULIN, VIRAL PROTEIN, IMMUNE SYSTEM COMPLEX, Viral protein-Immune system COMPLEX
Deposited on 2000-03-22, released 2000-04-12
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-09.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: N/A
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: hemagglutinin (ha1 chain)
    Species: Influenza A virus (A/X-31(H3N2)) [TaxId:132504]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1eo8a_
  • Chain 'B':
    Compound: hemagglutinin (ha2 chain)
    Species: Influenza A virus (A/X-31(H3N2)) [TaxId:132504]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1eo8b_
  • Chain 'H':
    Compound: antibody (heavy chain)
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • GB CAB76381 (0-216)
      • conflict (64)
      • conflict (191-192)
    Domains in SCOPe 2.08: d1eo8h1, d1eo8h2, d1eo8h3
  • Chain 'L':
    Compound: antibody (light chain)
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • GB CAB76382 (0-120)
      • conflict (38)
    Domains in SCOPe 2.08: d1eo8l1, d1eo8l2
  • Heterogens: NAG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1eo8A (A:)
qdlpgndnstatlclghhavpngtlvktitddqievtnatelvqssstgkicnnphrild
gidctlidallgdphcdvfqnetwdlfverskafsncypydvpdyaslrslvassgtlef
itegftwtgvtqnggsnackrgpgsgffsrlnwltksgstypvlnvtmpnndnfdklyiw
gihhpstnqeqtslyvqasgrvtvstrrsqqtiipnigsrpwvrglssrisiywtivkpg
dvlvinsngnliaprgyfkmrtgkssimrsdapidtcisecitpngsipndkpfqnvnki
tygacpkyvkqntlklatgmrnvpekqt

    Sequence, based on observed residues (ATOM records): (download) 
    >1eo8A (A:)
statlclghhavpngtlvktitddqievtnatelvqssstgkicnnphrildgidctlid
allgdphcdvfqnetwdlfverskafsncypydvpdyaslrslvassgtlefitegftwt
gvtqnggsnackrgpgsgffsrlnwltksgstypvlnvtmpnndnfdklyiwgihhpstn
qeqtslyvqasgrvtvstrrsqqtiipnigsrpwvrglssrisiywtivkpgdvlvinsn
gnliaprgyfkmrtgkssimrsdapidtcisecitpngsipndkpfqnvnkitygacpky
vkqntlklatgmrnvpekq

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1eo8B (B:)
glfgaiagfiengwegmidgwygfrhqnsegtgqaadlkstqaaidqingklnrviektn
ekfhqiekefsevegriqdlekyvedtkidlwsynaellvalenqhtidltdsemnklfe
ktrrqlrenaeemgngcfkiyhkcdnaciesirngtydhdvyrdealnnrfqikg

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1eo8H (H:)
qvqlqqsgaelmkpgpsvkisckatgysfstyfiewirqrpghglewigeilpgsdntnf
nekfkdratftadtpsntaymqlssltsedsavyycarptgrlwfsywgqgtlvtvsaak
ttppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdly
tlsssvtvpssprpsetvtcnvahpasstkvdkkivp

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1eo8L (L:)
qiiltqspaimsaspgekvtmtcsassdisymhwyqqksdtspkiwiydtsklasgvpar
fsgsgsgtsysltistmeaedaatyychqrssyptfgggtkleikradaaptvsifppsk
iqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstltlt
kdeyerhnsytceathktstspivksfnrn