PDB entry 1emj

View 1emj on RCSB PDB site
Description: uracil-DNA glycosylase bound to DNA containing a 4'-thio-2'deoxyuridine analog product
Class: hydrolase/DNA
Keywords: alpha/beta fold, Uracil-DNA Glycosylase, protein/DNA, hydrolase/DNA COMPLEX
Deposited on 2000-03-16, released 2000-05-16
The last revision prior to the SCOPe 2.04 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.228
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: uracil-DNA glycosylase
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P13051 (0-222)
      • conflict (0-2)
    Domains in SCOPe 2.04: d1emja_
  • Chain 'B':
    Compound: DNA (5'-d(*tp*gp*tp*(asu)p*ap*tp*cp*tp*t)-3')
  • Chain 'C':
    Compound: DNA (5'-d(*ap*ap*ap*gp*ap*tp*ap*ap*cp*a)-3')
  • Heterogens: URA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1emjA (A:)
    meffgeswkkhlsgefgkpyfiklmgfvaeerkhytvyppphqvftwtqmcdikdvkvvi
    lgqdpyhgpnqahglcfsvqrpvppppsleniykelstdiedfvhpghgdlsgwakqgvl
    llnavltvrahqanshkergweqftdavvswlnqnsnglvfllwgsyaqkkgsaidrkrh
    hvlqtahpsplsvyrgffgcrhfsktnellqksgkkpidwkel
    

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.