PDB entry 1ea4

View 1ea4 on RCSB PDB site
Description: transcriptional repressor copg/22bp dsdna complex
Class: gene regulation/DNA
Keywords: transcriptional repressor, DNA-binding protein, plasmid, protein-DNA complex, gene regulation/DNA
Deposited on 2000-11-05, released 2001-07-05
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.95 Å
R-factor: 0.23
AEROSPACI score: 0.18 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: transcriptional repressor copg
    Species: STREPTOCOCCUS AGALACTIAE [TaxId:1311]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1ea4a_
  • Chain 'B':
    Compound: transcriptional repressor copg
    Species: STREPTOCOCCUS AGALACTIAE [TaxId:1311]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1ea4b_
  • Chain 'D':
    Compound: transcriptional repressor copg
    Species: STREPTOCOCCUS AGALACTIAE [TaxId:1311]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1ea4d_
  • Chain 'E':
    Compound: transcriptional repressor copg
    Species: STREPTOCOCCUS AGALACTIAE [TaxId:1311]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1ea4e_
  • Chain 'F':
    Compound: transcriptional repressor copg
    Species: STREPTOCOCCUS AGALACTIAE [TaxId:1311]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1ea4f_
  • Chain 'G':
    Compound: transcriptional repressor copg
    Species: STREPTOCOCCUS AGALACTIAE [TaxId:1311]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1ea4g_
  • Chain 'H':
    Compound: transcriptional repressor copg
    Species: STREPTOCOCCUS AGALACTIAE [TaxId:1311]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1ea4h_
  • Chain 'J':
    Compound: transcriptional repressor copg
    Species: STREPTOCOCCUS AGALACTIAE [TaxId:1311]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1ea4j_
  • Chain 'K':
    Compound: transcriptional repressor copg
    Species: STREPTOCOCCUS AGALACTIAE [TaxId:1311]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1ea4k_
  • Chain 'L':
    Compound: transcriptional repressor copg
    Species: STREPTOCOCCUS AGALACTIAE [TaxId:1311]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1ea4l_
  • Chain 'U':
    Compound: DNA (5'-d(*tp*ap*ap*cp*cp*gp*tp*gp *cp*ap*cp*tp*cp*ap*ap*tp*gp*cp*ap*ap*tp*c)-3')
  • Chain 'V':
    Compound: DNA(5'-d(*ap*gp*ap*tp*tp*gp*cp*ap*tp *tp*gp*ap*gp*tp*gp*cp*ap*cp*gp*gp*tp*t)-3')
  • Chain 'W':
    Compound: DNA (5'-d(*tp*ap*ap*cp*cp*gp*tp*gp *cp*ap*cp*tp*cp*ap*ap*tp*gp*cp*ap*ap*tp*c)-3')
  • Chain 'X':
    Compound: DNA(5'-d(*ap*gp*ap*tp*tp*gp*cp*ap*tp *tp*gp*ap*gp*tp*gp*cp*ap*cp*gp*gp*tp*t)-3')
  • Chain 'Y':
    Compound: DNA (5'-d(*tp*ap*ap*cp*cp*gp*tp*gp *cp*ap*cp*tp*cp*ap*ap*tp*gp*cp*ap*ap*tp*c)-3')
  • Chain 'Z':
    Compound: DNA(5'-d(*ap*gp*ap*tp*tp*gp*cp*ap*tp *tp*gp*ap*gp*tp*gp*cp*ap*cp*gp*gp*tp*t)-3')
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1ea4A (A:)
mkkrltitlsesvlenlekmaremglsksamisvalenykkgqek

    Sequence, based on observed residues (ATOM records): (download) 
    >1ea4A (A:)
kkrltitlsesvlenlekmaremglsksamisvalenykkgq

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1ea4B (B:)
mkkrltitlsesvlenlekmaremglsksamisvalenykkgqek

    Sequence, based on observed residues (ATOM records): (download) 
    >1ea4B (B:)
mkkrltitlsesvlenlekmaremglsksamisvalenykk

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1ea4D (D:)
mkkrltitlsesvlenlekmaremglsksamisvalenykkgqek

    Sequence, based on observed residues (ATOM records): (download) 
    >1ea4D (D:)
mkkrltitlsesvlenlekmaremglsksamisvalenykkgq

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >1ea4E (E:)
mkkrltitlsesvlenlekmaremglsksamisvalenykkgqek

    Sequence, based on observed residues (ATOM records): (download) 
    >1ea4E (E:)
mkkrltitlsesvlenlekmaremglsksamisvalenykkgqe

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1ea4F (F:)
mkkrltitlsesvlenlekmaremglsksamisvalenykkgqek

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >1ea4G (G:)
mkkrltitlsesvlenlekmaremglsksamisvalenykkgqek

    Sequence, based on observed residues (ATOM records): (download) 
    >1ea4G (G:)
mkkrltitlsesvlenlekmaremglsksamisvalenykkg

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >1ea4H (H:)
mkkrltitlsesvlenlekmaremglsksamisvalenykkgqek

    Sequence, based on observed residues (ATOM records): (download) 
    >1ea4H (H:)
kkrltitlsesvlenlekmaremglsksamisvalenykkgqek

  • Chain 'J':
    Sequence, based on SEQRES records: (download) 
    >1ea4J (J:)
mkkrltitlsesvlenlekmaremglsksamisvalenykkgqek

    Sequence, based on observed residues (ATOM records): (download) 
    >1ea4J (J:)
mkkrltitlsesvlenlekmaremglsksamisvalenykkgqe

  • Chain 'K':
    Sequence, based on SEQRES records: (download) 
    >1ea4K (K:)
mkkrltitlsesvlenlekmaremglsksamisvalenykkgqek

    Sequence, based on observed residues (ATOM records): (download) 
    >1ea4K (K:)
mkkrltitlsesvlenlekmaremglsksamisvalenykkgq

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >1ea4L (L:)
mkkrltitlsesvlenlekmaremglsksamisvalenykkgqek

    Sequence, based on observed residues (ATOM records): (download) 
    >1ea4L (L:)
mkkrltitlsesvlenlekmaremglsksamisvalenykkgqe

  • Chain 'U':
    No sequence available.

  • Chain 'V':
    No sequence available.

  • Chain 'W':
    No sequence available.

  • Chain 'X':
    No sequence available.

  • Chain 'Y':
    No sequence available.

  • Chain 'Z':
    No sequence available.