PDB entry 1e5p

View 1e5p on RCSB PDB site
Description: Crystal structure of aphrodisin, a sex pheromone from female hamster
Class: lipocalin
Keywords: lipocalin, pheromone, hamster
Deposited on 2000-07-28, released 2001-07-26
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-09-18, with a file datestamp of 2019-09-13.
Experiment type: XRAY
Resolution: 1.63 Å
R-factor: N/A
AEROSPACI score: 0.43 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: aphrodisin
    Species: Mesocricetus auratus [TaxId:10036]
    Gene: MESOCRICETUS AURATUS APHRODISIN GENE
    Database cross-references and differences (RAF-indexed):
    • Uniprot P09465 (Start-150)
      • conflict (72)
      • modified residue (44)
      • modified residue (98)
      • modified residue (107)
    Domains in SCOPe 2.08: d1e5pa_
  • Chain 'B':
    Compound: aphrodisin
    Species: Mesocricetus auratus [TaxId:10036]
    Gene: MESOCRICETUS AURATUS APHRODISIN GENE
    Database cross-references and differences (RAF-indexed):
    • Uniprot P09465 (Start-150)
      • conflict (72)
      • modified residue (44)
      • modified residue (98)
      • modified residue (107)
    Domains in SCOPe 2.08: d1e5pb_
  • Chain 'C':
    Compound: aphrodisin
    Species: Mesocricetus auratus [TaxId:10036]
    Gene: MESOCRICETUS AURATUS APHRODISIN GENE
    Database cross-references and differences (RAF-indexed):
    • Uniprot P09465 (Start-150)
      • conflict (72)
      • modified residue (44)
      • modified residue (98)
      • modified residue (107)
    Domains in SCOPe 2.08: d1e5pc_
  • Chain 'D':
    Compound: aphrodisin
    Species: Mesocricetus auratus [TaxId:10036]
    Gene: MESOCRICETUS AURATUS APHRODISIN GENE
    Database cross-references and differences (RAF-indexed):
    • Uniprot P09465 (Start-150)
      • conflict (72)
      • modified residue (44)
      • modified residue (98)
      • modified residue (107)
    Domains in SCOPe 2.08: d1e5pd_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1e5pA (A:)
qdfaelqgkwytiviaadnlekieeggplrfyfrhidcykncsemeitfyvitnnqcskt
tvigylkgngtyetqfegnnifqplyitsdkifftnknmdragqetnmivvagkgnaltp
eeneilvqfahekkipvenilnilatdtcpe

    Sequence, based on observed residues (ATOM records): (download) 
    >1e5pA (A:)
faelqgkwytiviaadnlekieeggplrfyfrhidcykncsemeitfyvitnnqcskttv
igylkgngtyetqfegnnifqplyitsdkifftnknmdragqetnmivvagkgnaltpee
neilvqfahekkipvenilnilatdtcpe

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1e5pB (B:)
qdfaelqgkwytiviaadnlekieeggplrfyfrhidcykncsemeitfyvitnnqcskt
tvigylkgngtyetqfegnnifqplyitsdkifftnknmdragqetnmivvagkgnaltp
eeneilvqfahekkipvenilnilatdtcpe

    Sequence, based on observed residues (ATOM records): (download) 
    >1e5pB (B:)
aelqgkwytiviaadnlekieeggplrfyfrhidcykncsemeitfyvitnnqcskttvi
gylkgngtyetqfegnnifqplyitsdkifftnknmdragqetnmivvagkgnaltpeen
eilvqfahekkipvenilnilatdtcpe

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1e5pC (C:)
qdfaelqgkwytiviaadnlekieeggplrfyfrhidcykncsemeitfyvitnnqcskt
tvigylkgngtyetqfegnnifqplyitsdkifftnknmdragqetnmivvagkgnaltp
eeneilvqfahekkipvenilnilatdtcpe

    Sequence, based on observed residues (ATOM records): (download) 
    >1e5pC (C:)
elqgkwytiviaadnlekieeggplrfyfrhidcykncsemeitfyvitnnqcskttvig
ylkgngtyetqfegnnifqplyitsdkifftnknmdragqetnmivvagkgnaltpeene
ilvqfahekkipvenilnilatdtcpe

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1e5pD (D:)
qdfaelqgkwytiviaadnlekieeggplrfyfrhidcykncsemeitfyvitnnqcskt
tvigylkgngtyetqfegnnifqplyitsdkifftnknmdragqetnmivvagkgnaltp
eeneilvqfahekkipvenilnilatdtcpe

    Sequence, based on observed residues (ATOM records): (download) 
    >1e5pD (D:)
faelqgkwytiviaadnlekieeggplrfyfrhidcykncsemeitfyvitnnqcskttv
igylkgngtyetqfegnnifqplyitsdkifftnknmdragqetnmivvagkgnaltpee
neilvqfahekkipvenilnilatdtcpe