PDB entry 1dze
View 1dze on RCSB PDB site
Description: Structure of the M Intermediate of Bacteriorhodopsin trapped at 100K
Class: bacteriorhodopsin
Keywords: bacteriorhodopsin, proton pump, membrane protein, retinal protein, photoreceptor, reaction intermediate, halobacteria, ion pump, helix, sliding
Deposited on
2000-02-25, released
2000-08-16
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-07-29, with a file datestamp of
2020-06-29.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.27
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: bacteriorhodopsin (m intermediate)
Species: HALOBACTERIUM SALINARIUM [TaxId:2242]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1dzea_ - Heterogens: RET, L1P, L2P, L3P, L4P, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1dzeA (A:)
qaqitgrpewiwlalgtalmglgtlyflvkgmgvsdpdakkfyaittlvpaiaftmylsm
llgygltmvpfggeqnpiywaryadwlfttplllldlallvdadqgtilalvgadgimig
tglvgaltkvysyrfvwwaistaamlyilyvlffgftskaesmrpevastfkvlrnvtvv
lwsaypvvwligsegagivplnietllfmvldvsakvgfglillrsraifgeaeapepsa
gdgaaats
Sequence, based on observed residues (ATOM records): (download)
>1dzeA (A:)
grpewiwlalgtalmglgtlyflvkgmgvsdpdakkfyaittlvpaiaftmylsmllgyg
ltmvpfggeqnpiywaryadwlfttplllldlallvdadqgtilalvgadgimigtglvg
altkvysyrfvwwaistaamlyilyvlffgftskaesmrpevastfkvlrnvtvvlwsay
pvvwligsegagivplnietllfmvldvsakvgfglillrsraif