PDB entry 1dyl

View 1dyl on RCSB PDB site
Description: 9 angstrom resolution cryo-em reconstruction structure of semliki forest virus (sfv) and fitting of the capsid protein structure in the em density
Deposited on 2000-02-02, released 2000-08-18
The last revision was dated 2019-12-18, with a file datestamp of 2019-12-13.
Experiment type: EM
Resolution: 9 Å
R-factor: N/A
AEROSPACI score: -0.09 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: nucleocapsid protein
    Species: SEMLIKI FOREST VIRUS [TaxId:11033]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: nucleocapsid protein
    Species: SEMLIKI FOREST VIRUS [TaxId:11033]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: nucleocapsid protein
    Species: SEMLIKI FOREST VIRUS [TaxId:11033]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: nucleocapsid protein
    Species: SEMLIKI FOREST VIRUS [TaxId:11033]
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOP 1.55, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >1dylA (A:)
cifevkhegkvtgyaclvgdkvmkpahvkgvidnadlaklafkksskydlecaqipvhmr
sdaskythekpeghynwhhgavqysggrftiptgagkpgdsgrpifdnkgrvvaivlgga
negsrtalsvvtwnkdmvtrvtpegseew

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >1dylB (B:)
cifevkhegkvtgyaclvgdkvmkpahvkgvidnadlaklafkksskydlecaqipvhmr
sdaskythekpeghynwhhgavqysggrftiptgagkpgdsgrpifdnkgrvvaivlgga
negsrtalsvvtwnkdmvtrvtpegseew

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >1dylC (C:)
cifevkhegkvtgyaclvgdkvmkpahvkgvidnadlaklafkksskydlecaqipvhmr
sdaskythekpeghynwhhgavqysggrftiptgagkpgdsgrpifdnkgrvvaivlgga
negsrtalsvvtwnkdmvtrvtpegseew

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >1dylD (D:)
cifevkhegkvtgyaclvgdkvmkpahvkgvidnadlaklafkksskydlecaqipvhmr
sdaskythekpeghynwhhgavqysggrftiptgagkpgdsgrpifdnkgrvvaivlgga
negsrtalsvvtwnkdmvtrvtpegseew