PDB entry 1dvf

View 1dvf on RCSB PDB site
Description: idiotopic antibody d1.3 fv fragment-antiidiotopic antibody e5.2 fv fragment complex
Class: complex (idiotope-antiidiotope)
Keywords: complex (idiotope-antiidiotope), immunoglobulin
Deposited on 1996-04-13, released 1996-08-17
The last revision prior to the SCOPe 2.01 freeze date was dated 2011-11-16, with a file datestamp of 2011-11-11.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.194
AEROSPACI score: 0.45 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: fv d1.3
    Species: Mus musculus [TaxId:10090]
    Gene:
    Database cross-references and differences (RAF-indexed):
    • Uniprot P01635 (0-End)
      • conflict (2)
      • conflict (49-51)
      • conflict (95)
    Domains in SCOPe 2.01: d1dvfa_
  • Chain 'B':
    Compound: fv d1.3
    Species: Mus musculus [TaxId:10090]
    Gene:
    Database cross-references and differences (RAF-indexed):
    • Uniprot P01820 (0-115)
      • conflict (111)
    Domains in SCOPe 2.01: d1dvfb_
  • Chain 'C':
    Compound: fv e5.2
    Species: Mus musculus [TaxId:10090]
    Gene:
    Database cross-references and differences (RAF-indexed):
    • Uniprot P01646 (0-106)
      • conflict (3)
      • conflict (6-7)
    Domains in SCOPe 2.01: d1dvfc_
  • Chain 'D':
    Compound: fv e5.2
    Species: Mus musculus [TaxId:10090]
    Gene:
    Database cross-references and differences (RAF-indexed):
    • PDB 1DVF (0-120)
    Domains in SCOPe 2.01: d1dvfd_
  • Heterogens: ZN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1dvfA (A:)
    divltqspaslsasvgetvtitcrasgnihnylawyqqkqgkspqllvyytttladgvps
    rfsgsgsgtqyslkinslqpedfgsyycqhfwstprtfgggtkleikr
    

    Sequence, based on observed residues (ATOM records): (download)
    >1dvfA (A:)
    divltqspaslsasvgetvtitcrasgnihnylawyqqkqgkspqllvyytttladgvps
    rfsgsgsgtqyslkinslqpedfgsyycqhfwstprtfgggtkleik
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1dvfB (B:)
    qvqlqesgpglvapsqslsitctvsgfsltgygvnwvrqppgkglewlgmiwgdgntdyn
    salksrlsiskdnsksqvflkmnslhtddtaryycarerdyrldywgqgttltvss
    

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1dvfC (C:)
    diqltqspsslsaslgdrvtiscrasqdisnylnwyqqkpdgtvklliyytsrlhsgvps
    rfsgsgsgtdysltisnleqediatyfcqqgntlpwtfgggtkleik
    

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1dvfD (D:)
    qvqlqqsgtelvksgasvklsctasgfnikdthmnwvkqrpeqglewigridpangniqy
    dpkfrgkatitadtssntaylqlssltsedtavyycatkviyyqgrgamdywgqgttltv
    s