PDB entry 1dog

View 1dog on RCSB PDB site
Description: refined structure for the complex of 1-deoxynojirimycin with glucoamylase from (aspergillus awamori) var. x100 to 2.4 angstroms resolution
Class: hydrolase
Keywords: hydrolase
Deposited on 1993-01-12, released 1994-01-31
The last revision prior to the SCOPe 2.02 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-25.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.119
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: glucoamylase-471
    Species: Aspergillus awamori [TaxId:105351]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P23176 (0-469)
      • conflict (57)
      • conflict (59)
      • conflict (115)
    Domains in SCOPe 2.02: d1doga_
  • Heterogens: MAN, NOJ, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1dogA (A:)
atldswlsneatvartailnnigadgawvsgadsgivvaspstdnpdyfytwtrdsglvi
ktlvdlfrngdtdllstiehyissqaiiqgvsnpsgdlssgglgepkfnvdetaytgswg
rpqrdgpalratamigfgqwlldngytsaateivwplvrndlsyvaqywnqtgydlweev
ngssfftiavqhralvegsafatavgsscswcdsqapqilcylqsfwtgsyilanfdssr
sgkdtntllgsihtfdpeagcddstfqpcspralanhkevvdsfrsiytlndglsdseav
avgrypedsyyngnpwflctlaaaeqlydalyqwdkqgsleitdvsldffkalysgaatg
tyssssstyssivsavktfadgfvsivethaasngslseqfdksdgdelsardltwsyaa
lltannrrnsvvppswgetsassvpgtcaatsasgtyssvtvtswpsiva