PDB entry 1dnp

View 1dnp on RCSB PDB site
Description: structure of deoxyribodipyrimidine photolyase
Class: lyase (carbon-carbon)
Keywords: DNA repair, electron transfer, excitation energy transfer, lyase, carbon-carbon, lyase (carbon-carbon)
Deposited on 1995-07-03, released 1996-08-01
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.172
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA photolyase
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1dnpa1, d1dnpa2
  • Chain 'B':
    Compound: DNA photolyase
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1dnpb1, d1dnpb2
  • Heterogens: FAD, MHF, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1dnpA (A:)
tthlvwfrqdlrlhdnlalaaacrnssarvlalyiatprqwathnmsprqaelinaqlng
lqialaekgipllfrevddfvasveivkqvcaensvthlfynyqyevnerardveveral
rnvvcegfddsvilppgavmtgnhemykvftpfknawlkrlregmpecvaapkvrssgsi
epspsitlnyprqsfdtahfpveekaaiaqlrqfcqngageyeqqrdfpavegtsrlsas
latgglsprqclhrllaeqpqaldggagsvwlneliwrefyrhlityhpslckhrpfiaw
tdrvqwqsnpahlqawqegktgypivdaamrqlnstgwmhnrlrmitasflvkdllidwr
egeryfmsqlidgdlaannggwqwaastgtdaapyfrifnpttqgekfdhegefirqwlp
elrdvpgkvvhepwkwaqkagvtldypqpivehkearvqtlaayeaarkgk

    Sequence, based on observed residues (ATOM records): (download) 
    >1dnpA (A:)
tthlvwfrqdlrlhdnlalaaacrnssarvlalyiatprqwathnmsprqaelinaqlng
lqialaekgipllfrevddfvasveivkqvcaensvthlfynyqyevnerardveveral
rnvvcegfddsvilppgavmtgnhemykvftpfknawlkrlregmpecvaapkvrssgsi
epspsitlnyprqsfdtahfpveekaaiaqlrqfcqngageyeqqrdfpavegtsrlsas
latgglsprqclhrllaeqpqaldggagsvwlneliwrefyrhlityhpslckhrpfiaw
tdrvqwqsnpahlqawqegktgypivdaamrqlnstgwmhnrlrmitasflvkdllidwr
egeryfmsqlidgdlaannggwqwaastgtdaapyfrifnpttqgekfdhegefirqwlp
elrdvpgkvvhepwkwaqkagvtldypqpivehkearvqtlaayeaark

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1dnpB (B:)
tthlvwfrqdlrlhdnlalaaacrnssarvlalyiatprqwathnmsprqaelinaqlng
lqialaekgipllfrevddfvasveivkqvcaensvthlfynyqyevnerardveveral
rnvvcegfddsvilppgavmtgnhemykvftpfknawlkrlregmpecvaapkvrssgsi
epspsitlnyprqsfdtahfpveekaaiaqlrqfcqngageyeqqrdfpavegtsrlsas
latgglsprqclhrllaeqpqaldggagsvwlneliwrefyrhlityhpslckhrpfiaw
tdrvqwqsnpahlqawqegktgypivdaamrqlnstgwmhnrlrmitasflvkdllidwr
egeryfmsqlidgdlaannggwqwaastgtdaapyfrifnpttqgekfdhegefirqwlp
elrdvpgkvvhepwkwaqkagvtldypqpivehkearvqtlaayeaarkgk

    Sequence, based on observed residues (ATOM records): (download) 
    >1dnpB (B:)
tthlvwfrqdlrlhdnlalaaacrnssarvlalyiatprqwathnmsprqaelinaqlng
lqialaekgipllfrevddfvasveivkqvcaensvthlfynyqyevnerardveveral
rnvvcegfddsvilppgavmtgnhemykvftpfknawlkrlregmpecvaapkvrssgsi
epspsitlnyprqsfdtahfpveekaaiaqlrqfcqngageyeqqrdfpavegtsrlsas
latgglsprqclhrllaeqpqaldggagsvwlneliwrefyrhlityhpslckhrpfiaw
tdrvqwqsnpahlqawqegktgypivdaamrqlnstgwmhnrlrmitasflvkdllidwr
egeryfmsqlidgdlaannggwqwaastgtdaapyfrifnpttqgekfdhegefirqwlp
elrdvpgkvvhepwkwaqkagvtldypqpivehkearvqtlaayeaark