PDB entry 1dlb

View 1dlb on RCSB PDB site
Description: helical interactions in the hiv-1 gp41 core reveals structural basis for the inhibitory activity of gp41 peptides
Class: viral protein
Keywords: GP41, HIV-1, MEMBRANE FUSION, HIV-1 INHIBITION, VIRUS/VIRAL PROTEIN, Viral protein
Deposited on 1999-12-09, released 1999-12-15
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-08-09, with a file datestamp of 2017-08-04.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: hiv-1 envelope glycoprotein gp41
    Species: Human immunodeficiency virus 1 [TaxId:11676]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P04578 (40-End)
      • see remark 999 (34)
      • see remark 999 (37-39)
      • engineered (64)
    Domains in SCOPe 2.08: d1dlba_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1dlbA (A:)
    sgivqqqnnllraieaqqhllqltvwgikqlqarsggrggwmewdreinnytslihslie
    esqnlqek
    

    Sequence, based on observed residues (ATOM records): (download)
    >1dlbA (A:)
    givqqqnnllraieaqqhllqltvwgikqlqarsrggwmewdreinnytslihslieesq
    nlq