PDB entry 1dkg

View 1dkg on RCSB PDB site
Description: crystal structure of the nucleotide exchange factor grpe bound to the ATPase domain of the molecular chaperone dnak
Class: complex (hsp24/hsp70)
Keywords: hsp70, grpe, molecular chaperone, nucleotide exchange factor, coiled-coil, complex (hsp24/hsp70)
Deposited on 1997-02-13, released 1997-08-20
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.223
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: nucleotide exchange factor grpe
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P09372 (Start-196)
      • engineered (121)
    Domains in SCOPe 2.08: d1dkga1, d1dkga2
  • Chain 'B':
    Compound: nucleotide exchange factor grpe
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P09372
      • engineered (121)
    Domains in SCOPe 2.08: d1dkgb1, d1dkgb2
  • Chain 'D':
    Compound: molecular chaperone dnak
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P04475 (Start-382)
      • engineered (318)
    Domains in SCOPe 2.08: d1dkgd1, d1dkgd2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1dkgA (A:)
msskeqktpegqapeeiimdqheeieavepeasaeqvdprdekvanleaqlaeaqtrerd
gilrvkaemenlrrrteldiekahkfalekfinellpvidsldralevadkanpdmsamv
edieltlksmldvvrkfgveviaetnvpldpnvhqaiamvesddvapgnvlgimqkgytl
ngrtiraamvtvakaka

    Sequence, based on observed residues (ATOM records): (download) 
    >1dkgA (A:)
aeqvdprdekvanleaqlaeaqtrerdgilrvkaemenlrrrteldiekahkfalekfin
ellpvidsldralevamsamvedieltlksmldvvrkfgveviaetnvpldpnvhqaiam
vesddvapgnvlgimqkgytlngrtiraamvtvakaka

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1dkgB (B:)
msskeqktpegqapeeiimdqheeieavepeasaeqvdprdekvanleaqlaeaqtrerd
gilrvkaemenlrrrteldiekahkfalekfinellpvidsldralevadkanpdmsamv
edieltlksmldvvrkfgveviaetnvpldpnvhqaiamvesddvapgnvlgimqkgytl
ngrtiraamvtvakaka

    Sequence, based on observed residues (ATOM records): (download) 
    >1dkgB (B:)
dprdekvanleaqlaeaqtrerdgilrvkaemenlrrrteldiekahkfalekfinellp
vidsldralevmsamvedieltlksmldvvrkfgveviaetnvpldpnvhqaiamvesdd
vapgnvlgimqkgytlngrtiraamvtvaka

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1dkgD (D:)
mgkiigidlgttnscvaimdgttprvlenaegdrttpsiiaytqdgetlvgqpakrqavt
npqntlfaikrligrrfqdeevqrdvsimpfkiiaadngdawvevkgqkmappqisaevl
kkmkktaedylgepvteavitvpayfndaqrqatkdagriaglevkriineptaaalayg
ldkgtgnrtiavydlgggtfdisiieidevdgektfevlatngdthlggedfdsrlinyl
veefkkdqgidlrndplamqrlkeaaekakielssaqqtdvnlpyitadatgpkhmnikv
trakleslvedlvnrsiellkvalqdaglsvsdiddvilvggqtrmpmvqkkvaeffgke
prkdvnpdeavaigaavqggvlt

    Sequence, based on observed residues (ATOM records): (download) 
    >1dkgD (D:)
kiigidlgttnscvaimdgttprvlenaegdrttpsiiaytqdgetlvgqpakrqavtnp
qntlfaikrligrrfqdeevqrdvsimpfkiiaadngdawvevkgqkmappqisaevlkk
mkktaedylgepvteavitvpayfndaqrqatkdagriaglevkriineptaaalaygld
ktgnrtiavydlgggtfdisiieidektfevlatngdthlggedfdsrlinylveefkkd
qgidlrndplamqrlkeaaekakielssaqqtdvnlpyitadatgpkhmnikvtrakles
lvedlvnrsiellkvalqdaglsvsdiddvilvggqtrmpmvqkkvaeffgkeprkdvnp
deavaigaavqggvlt