PDB entry 1dka

View 1dka on RCSB PDB site
Description: dialkylglycine decarboxylase structure: bifunctional active site and alkali metal binding sites
Class: lyase(decarboxylase)
Keywords: lyase(decarboxylase)
Deposited on 1993-06-18, released 1994-10-15
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-11-29, with a file datestamp of 2017-11-24.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: N/A
AEROSPACI score: 0.18 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 2,2-dialkylglycine decarboxylase (pyruvate)
    Species: Burkholderia cepacia [TaxId:292]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P16932 (Start-432)
      • conflict (14)
      • conflict (80)
    Domains in SCOPe 2.07: d1dkaa_
  • Heterogens: NA, K, PLP, MES, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1dkaA (A:)
    mslnddatfwrnarhhlvryggtfepmiierakgsfvydadgraildftsgqmsavlghc
    hpeivsvigeyagkldhlfsemlsrpvvdlatrlanitppgldralllstgaesneaair
    maklvtgkyeivgfaqswhgmtgaaasatysagrkgvgpaavgsfaipapftyrprfern
    gaydylaeldyafdlidrqssgnlaafiaepilssggiielpdgymaalkrkceargmll
    ildeaqtgvgrtgtmfacqrdgvtpdiltlsktlgaglplaaivtsaaieerahelgylf
    ytthvsdplpaavglrvldvvqrdglvaranvmgdrlrrglldlmerfdcigdvrgrgll
    lgveivkdrrtkepadglgakitrecmnlglsmnivqlpgmggvfriappltvsedeidl
    glsllgqaieral
    

    Sequence, based on observed residues (ATOM records): (download)
    >1dkaA (A:)
    lnddatfwrnarhhlvryggtfepmiierakgsfvydadgraildftsgqmsavlghchp
    eivsvigeyagkldhlfsemlsrpvvdlatrlanitppgldralllstgaesneaairma
    klvtgkyeivgfaqswhgmtgaaasatysagrkgvgpaavgsfaipapftyrprfernga
    ydylaeldyafdlidrqssgnlaafiaepilssggiielpdgymaalkrkceargmllil
    deaqtgvgrtgtmfacqrdgvtpdiltlsktlgaglplaaivtsaaieerahelgylfyt
    thvsdplpaavglrvldvvqrdglvaranvmgdrlrrglldlmerfdcigdvrgrglllg
    veivkdrrtkepadglgakitrecmnlglsmnivqlpgmggvfriappltvsedeidlgl
    sllgqaieral