PDB entry 1die

View 1die on RCSB PDB site
Description: observations of reaction intermediates and the mechanism of aldose-ketose interconversion by d-xylose isomerase
Class: isomerase(intramolecular oxidoreductase)
Keywords: isomerase(intramolecular oxidoreductase)
Deposited on 1992-06-04, released 1993-07-15
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-11-29, with a file datestamp of 2017-11-24.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: d-xylose isomerase
    Species: Arthrobacter sp. [TaxId:1669]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1diea_
  • Chain 'B':
    Compound: d-xylose isomerase
    Species: Arthrobacter sp. [TaxId:1669]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1dieb_
  • Heterogens: MG, NOJ, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1dieA (A:)
svqptpadhftfglwtvgwtgadpfgvatrknldpveavhklaelgaygitfhdndlipf
dateaerekilgdfnqalkdtglkvpmvttnlfshpvfkdggftsndrsirrfalakvlh
nidlaaemgaetfvmwggregseydgskdlaaaldrmregvdtaagyikdkgynlriale
pkpneprgdiflptvghglafieqlehgdivglnpetgheqmaglnfthgiaqalwaekl
fhidlngqrgikydqdlvfghgdltsafftvdllengfpnggpkytgprhfdykpsrtdg
ydgvwdsakanmsmylllkeralafradpevqeamktsgvfelgettlnagesaadlmnd
sasfagfdaeaaaernfafirlnqlaiehllgsr

    Sequence, based on observed residues (ATOM records): (download) 
    >1dieA (A:)
vqptpadhftfglwtvgwtgadpfgvatrknldpveavhklaelgaygitfhdndlipfd
ateaerekilgdfnqalkdtglkvpmvttnlfshpvfkdggftsndrsirrfalakvlhn
idlaaemgaetfvmwggregseydgskdlaaaldrmregvdtaagyikdkgynlrialep
kpneprgdiflptvghglafieqlehgdivglnpetgheqmaglnfthgiaqalwaeklf
hidlngqrgikydqdlvfghgdltsafftvdllengfpnggpkytgprhfdykpsrtdgy
dgvwdsakanmsmylllkeralafradpevqeamktsgvfelgettlnagesaadlmnds
asfagfdaeaaaernfafirlnqlaiehllgsr

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1dieB (B:)
svqptpadhftfglwtvgwtgadpfgvatrknldpveavhklaelgaygitfhdndlipf
dateaerekilgdfnqalkdtglkvpmvttnlfshpvfkdggftsndrsirrfalakvlh
nidlaaemgaetfvmwggregseydgskdlaaaldrmregvdtaagyikdkgynlriale
pkpneprgdiflptvghglafieqlehgdivglnpetgheqmaglnfthgiaqalwaekl
fhidlngqrgikydqdlvfghgdltsafftvdllengfpnggpkytgprhfdykpsrtdg
ydgvwdsakanmsmylllkeralafradpevqeamktsgvfelgettlnagesaadlmnd
sasfagfdaeaaaernfafirlnqlaiehllgsr

    Sequence, based on observed residues (ATOM records): (download) 
    >1dieB (B:)
vqptpadhftfglwtvgwtgadpfgvatrknldpveavhklaelgaygitfhdndlipfd
ateaerekilgdfnqalkdtglkvpmvttnlfshpvfkdggftsndrsirrfalakvlhn
idlaaemgaetfvmwggregseydgskdlaaaldrmregvdtaagyikdkgynlrialep
kpneprgdiflptvghglafieqlehgdivglnpetgheqmaglnfthgiaqalwaeklf
hidlngqrgikydqdlvfghgdltsafftvdllengfpnggpkytgprhfdykpsrtdgy
dgvwdsakanmsmylllkeralafradpevqeamktsgvfelgettlnagesaadlmnds
asfagfdaeaaaernfafirlnqlaiehllgsr