PDB entry 1dfu

View 1dfu on RCSB PDB site
Description: crystal structure of e.coli ribosomal protein l25 complexed with a 5s rRNA fragment at 1.8 a resolution
Class: ribosome
Keywords: protein-RNA complex, ribosome
Deposited on 1999-11-21, released 1999-12-02
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.207
AEROSPACI score: 0.49 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'M':
    Compound: 5s rRNA
    Species: synthetic, synthetic
  • Chain 'N':
    Compound: 5s rRNA
    Species: synthetic, synthetic
  • Chain 'P':
    Compound: ribosomal protein l25
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1dfup_
  • Heterogens: MG, HOH

PDB Chain Sequences:

  • Chain 'M':
    No sequence available.

  • Chain 'N':
    No sequence available.

  • Chain 'P':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1dfuP (P:)
    mftinaevrkeqgkgasrrlraankfpaiiyggkeaplaieldhdkvmnmqakaefysev
    ltivvdgkeikvkaqdvqrhpykpklqhidfvra