PDB entry 1dak

View 1dak on RCSB PDB site
Description: dethiobiotin synthetase from escherichia coli, complex reaction intermediate ADP and mixed anhydride
Class: ligase
Keywords: phoshporyl transfer, biotin biosynthesis, ligase, kinetic crystallography
Deposited on 1998-03-31, released 1999-04-06
The last revision prior to the SCOPe 2.07 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: 0.184
AEROSPACI score: 0.58 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: dethiobiotin synthetase
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1daka_
  • Heterogens: PO4, MG, DPU, ADP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1dakA (A:)
    skryfvtgtdtevgktvascallqaakaagyrtagykpvasgsektpeglrnsdalalqr
    nsslqldyatvnpytfaeptsphiisaqegrpieslvmsaglraleqqadwvlvegaggw
    ftplsdtftfadwvtqeqlpvilvvgvklgcinhamltaqviqhagltlagwvandvtpp
    gkrhaeymttltrmipapllgeipwlaenpenaatgkyinlall