SCOPe 2.01: Structural Classification of Proteins

PDB entry 1d8w

View 1d8w on RCSB PDB site
Description: l-rhamnose isomerase
Class: isomerase
Keywords: beta-alpha-8-barrels, aldose-ketose isomerization, hydride shift, isomerase
Deposited on 1999-10-26, released 2000-09-27
The last revision prior to the SCOPe 2.01 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: 0.178
AEROSPACI score: 0.57 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: l-rhamnose isomerase
Species: Escherichia coli [TaxId:562]
Database cross-references and differences (RAF-indexed):
- Uniprot P32170
  - modified residue (43)
  - modified residue (89)
  - modified residue (188)
  - modified residue (196)
  - modified residue (252)
  - modified residue (283)
  - modified residue (351)
  - modified residue (396)
Domains in SCOPe 2.01: d1d8wa_
Chain 'B':
Compound: l-rhamnose isomerase
Species: Escherichia coli [TaxId:562]
Database cross-references and differences (RAF-indexed):
- Uniprot P32170
  - modified residue (43)
  - modified residue (89)
  - modified residue (188)
  - modified residue (196)
  - modified residue (252)
  - modified residue (283)
  - modified residue (351)
  - modified residue (396)
Domains in SCOPe 2.01: d1d8wb_
Chain 'C':
Compound: l-rhamnose isomerase
Species: Escherichia coli [TaxId:562]
Database cross-references and differences (RAF-indexed):
- Uniprot P32170
  - modified residue (43)
  - modified residue (89)
  - modified residue (188)
  - modified residue (196)
  - modified residue (252)
  - modified residue (283)
  - modified residue (351)
  - modified residue (396)
Domains in SCOPe 2.01: d1d8wc_
Chain 'D':
Compound: l-rhamnose isomerase
Species: Escherichia coli [TaxId:562]
Database cross-references and differences (RAF-indexed):
- Uniprot P32170 (7-End)
  - modified residue (7)
  - modified residue (43)
  - modified residue (89)
  - modified residue (188)
  - modified residue (196)
  - modified residue (252)
  - modified residue (283)
  - modified residue (351)
  - modified residue (396)
Domains in SCOPe 2.01: d1d8wd_
Heterogens: ZN, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>1d8wA (A:)
ghhhhhhmttqleqawelakqrfaavgidveealrqldrlpvsmhcwqgddvsgfenpeg
sltggiqatgnypgkarnaselradleqamrlipgpkrlnlhaiylesdtpvsrdqikpe
hfknwvewakanqlgldfnpscfshplsadgftlshaddsirqfwidhckasrrvsayfg
eqlgtpsvmniwipdgmkditvdrlaprqrllaaldeviseklnpahhidavesklfgig
aesytvgsnefymgyatsrqtalcldaghfhptevisdkisaamlyvpqlllhvsrpvrw
dsdhvvllddetqaiaseivrhdlfdrvhigldffdasinriaawvigtrnmkkallral
leptaelrkleapgdytarlalleeqkslpwqavwemycqrhdtpagsewlesvrayeke
ilsrrg

Sequence, based on observed residues (ATOM records): (download)

>1d8wA (A:)
tqleqawelakqrfaavgidveealrqldrlpvsmhcwqgddvsgfenypgkarnaselr
adleqamrlipgpkrlnlhaiylesdtpvsrdqikpehfknwvewakanqlgldfnpscf
shplsadgftlshaddsirqfwidhckasrrvsayfgeqlgtpsvmniwipdgmkditvd
rlaprqrllaaldeviseklnpahhidavesklfgigaesytvgsnefymgyatsrqtal
cldaghfhptevisdkisaamlyvpqlllhvsrpvrwdsdhvvllddetqaiaseivrhd
lfdrvhigldffdasinriaawvigtrnmkkallralleptaelrkleapgdytarlall
eeqkslpwqavwemycqrhdtpagsewlesvrayekeilsrr

Chain 'B':
Sequence, based on SEQRES records: (download)

>1d8wB (B:)
ghhhhhhmttqleqawelakqrfaavgidveealrqldrlpvsmhcwqgddvsgfenpeg
sltggiqatgnypgkarnaselradleqamrlipgpkrlnlhaiylesdtpvsrdqikpe
hfknwvewakanqlgldfnpscfshplsadgftlshaddsirqfwidhckasrrvsayfg
eqlgtpsvmniwipdgmkditvdrlaprqrllaaldeviseklnpahhidavesklfgig
aesytvgsnefymgyatsrqtalcldaghfhptevisdkisaamlyvpqlllhvsrpvrw
dsdhvvllddetqaiaseivrhdlfdrvhigldffdasinriaawvigtrnmkkallral
leptaelrkleapgdytarlalleeqkslpwqavwemycqrhdtpagsewlesvrayeke
ilsrrg

Sequence, based on observed residues (ATOM records): (download)

>1d8wB (B:)
ttqleqawelakqrfaavgidveealrqldrlpvsmhcwqgddvsgfeypgkarnaselr
adleqamrlipgpkrlnlhaiylesdtpvsrdqikpehfknwvewakanqlgldfnpscf
shplsadgftlshaddsirqfwidhckasrrvsayfgeqlgtpsvmniwipdgmkditvd
rlaprqrllaaldeviseklnpahhidavesklfgigaesytvgsnefymgyatsrqtal
cldaghfhptevisdkisaamlyvpqlllhvsrpvrwdsdhvvllddetqaiaseivrhd
lfdrvhigldffdasinriaawvigtrnmkkallralleptaelrkleapgdytarlall
eeqkslpwqavwemycqrhdtpagsewlesvrayekeilsrr

Chain 'C':
Sequence, based on SEQRES records: (download)

>1d8wC (C:)
ghhhhhhmttqleqawelakqrfaavgidveealrqldrlpvsmhcwqgddvsgfenpeg
sltggiqatgnypgkarnaselradleqamrlipgpkrlnlhaiylesdtpvsrdqikpe
hfknwvewakanqlgldfnpscfshplsadgftlshaddsirqfwidhckasrrvsayfg
eqlgtpsvmniwipdgmkditvdrlaprqrllaaldeviseklnpahhidavesklfgig
aesytvgsnefymgyatsrqtalcldaghfhptevisdkisaamlyvpqlllhvsrpvrw
dsdhvvllddetqaiaseivrhdlfdrvhigldffdasinriaawvigtrnmkkallral
leptaelrkleapgdytarlalleeqkslpwqavwemycqrhdtpagsewlesvrayeke
ilsrrg

Sequence, based on observed residues (ATOM records): (download)

>1d8wC (C:)
tqleqawelakqrfaavgidveealrqldrlpvsmhcwqgddvsgfeypgkarnaselra
dleqamrlipgpkrlnlhaiylesdtpvsrdqikpehfknwvewakanqlgldfnpscfs
hplsadgftlshaddsirqfwidhckasrrvsayfgeqlgtpsvmniwipdgmkditvdr
laprqrllaaldeviseklnpahhidavesklfgigaesytvgsnefymgyatsrqtalc
ldaghfhptevisdkisaamlyvpqlllhvsrpvrwdsdhvvllddetqaiaseivrhdl
fdrvhigldffdasinriaawvigtrnmkkallralleptaelrkleapgdytarlalle
eqkslpwqavwemycqrhdtpagsewlesvrayekeilsrr

Chain 'D':
Sequence, based on SEQRES records: (download)

>1d8wD (D:)
ghhhhhhmttqleqawelakqrfaavgidveealrqldrlpvsmhcwqgddvsgfenpeg
sltggiqatgnypgkarnaselradleqamrlipgpkrlnlhaiylesdtpvsrdqikpe
hfknwvewakanqlgldfnpscfshplsadgftlshaddsirqfwidhckasrrvsayfg
eqlgtpsvmniwipdgmkditvdrlaprqrllaaldeviseklnpahhidavesklfgig
aesytvgsnefymgyatsrqtalcldaghfhptevisdkisaamlyvpqlllhvsrpvrw
dsdhvvllddetqaiaseivrhdlfdrvhigldffdasinriaawvigtrnmkkallral
leptaelrkleapgdytarlalleeqkslpwqavwemycqrhdtpagsewlesvrayeke
ilsrrg

Sequence, based on observed residues (ATOM records): (download)

>1d8wD (D:)
mttqleqawelakqrfaavgidveealrqldrlpvsmhcwqgddvsgfeypgkarnasel
radleqamrlipgpkrlnlhaiylesdtpvsrdqikpehfknwvewakanqlgldfnpsc
fshplsadgftlshaddsirqfwidhckasrrvsayfgeqlgtpsvmniwipdgmkditv
drlaprqrllaaldeviseklnpahhidavesklfgigaesytvgsnefymgyatsrqta
lcldaghfhptevisdkisaamlyvpqlllhvsrpvrwdsdhvvllddetqaiaseivrh
dlfdrvhigldffdasinriaawvigtrnmkkallralleptaelrkleapgdytarlal
leeqkslpwqavwemycqrhdtpagsewlesvrayekeilsrr