PDB entry 1d5i

View 1d5i on RCSB PDB site
Description: unliganded germline precursor of an oxy-cope catalytic antibody
Class: immune system
Keywords: immune system
Deposited on 1999-10-07, released 2000-02-09
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-06-21, with a file datestamp of 2017-06-16.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'H':
  Compound: chimeric germline precursor of oxy-cope catalytic antibody az-28 (heavy chain)
  Species: , [TaxId:9606]
  Database cross-references and differences (RAF-indexed):
  • Uniprot K7T9I5 (8-119)
    • expression tag (0-7)
    • conflict (98-103)
    • conflict (103)
    • conflict (103)
  • Uniprot P0DOX5 (120-220)
  Domains in SCOPe 2.08: d1d5ih1, d1d5ih2, d1d5ih3
• Chain 'L':
  Compound: chimeric germline precursor of oxy-cope catalytic antibody az-28 (light chain)
  Species: , [TaxId:9606]
  Gene: IGKC
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q7TS98 (0-106)
    • conflict (95)
    • conflict (99)
  • Uniprot P01834 (107-210)
  Domains in SCOPe 2.08: d1d5il1, d1d5il2
• Heterogens: CD, HOH

PDB Chain Sequences:

• Chain 'H':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >1d5iH (H:)
  qvqlqqsgaelmkpgasvkisckatgytfssywiewvkqrpghglewigeilpgsgstny
  nekfkgkatftadtssntaymqlssltsedsavyycarghsyyfydgdywgqgtsvtvss
  astkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqss
  glyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepk
  

  
  
• Chain 'L':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >1d5iL (L:)
  dikmtqspssmyaslgervtitckasqdinsylswfqqkpgkspktliyranrlvdgvps
  rfsgsgsgqdysltissleyedmgiyyclqydefpytfgsgtkleikrtvaapsvfifpp
  sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
  lskadyekhkvyacevthqglsspvtksfnr