PDB entry 1d5f

View 1d5f on RCSB PDB site
Description: structure of an e6ap-ubch7 complex: insights into the ubiquitination pathway
Class: ligase
Keywords: bilobal structure, elongated shape, e3 ligase, ligase
Deposited on 1999-10-07, released 1999-11-17
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-10-11, with a file datestamp of 2017-10-06.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: N/A
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: e6ap hect catalytic domain, e3 ligase
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1d5fa_
  • Chain 'B':
    Compound: e6ap hect catalytic domain, e3 ligase
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1d5fb_
  • Chain 'C':
    Compound: e6ap hect catalytic domain, e3 ligase
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1d5fc_

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1d5fA (A:)
    qlnpylrlkvrrdhiiddalvrlemiamenpadlkkqlyvefegeqgvdeggvskeffql
    vveeifnpdigmftydestklfwfnpssfetegqftligivlglaiynncildvhfpmvv
    yrklmgkkgtfrdlgdshpvlyqslkdlleyegnveddmmitfqisqtdlfgnpmmydlk
    engdkipitnenrkefvnlysdyilnksvekqfkafrrgfhmvtnesplkylfrpeeiel
    licgsrnldfqaleetteydggytrdsvlirefweivhsftdeqkrlflqfttgtdrapv
    gglgklkmiiakngpdterlptshtcfnvlllpeysskeklkerllkaityakgfgml
    

    Sequence, based on observed residues (ATOM records): (download)
    >1d5fA (A:)
    npylrlkvrrdhiiddalvrlemiamenpadlkkqlyvefegeqgvdeggvskeffqlvv
    eeifnpdigmftydestklfwfnpssfetegqftligivlglaiynncildvhfpmvvyr
    klmgkkgtfrdlgdshpvlyqslkdlleyegnveddmmitfqisqtdlfgnpmmydlken
    gdkipitnenrkefvnlysdyilnksvekqfkafrrgfhmvtnesplkylfrpeeielli
    cgsrnldfqaleetteydggytrdsvlirefweivhsftdeqkrlflqfttgtdrapvgg
    lgklkmiiakngpdterlptshtcfnvlllpeysskeklkerllkaitya
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >1d5fB (B:)
    qlnpylrlkvrrdhiiddalvrlemiamenpadlkkqlyvefegeqgvdeggvskeffql
    vveeifnpdigmftydestklfwfnpssfetegqftligivlglaiynncildvhfpmvv
    yrklmgkkgtfrdlgdshpvlyqslkdlleyegnveddmmitfqisqtdlfgnpmmydlk
    engdkipitnenrkefvnlysdyilnksvekqfkafrrgfhmvtnesplkylfrpeeiel
    licgsrnldfqaleetteydggytrdsvlirefweivhsftdeqkrlflqfttgtdrapv
    gglgklkmiiakngpdterlptshtcfnvlllpeysskeklkerllkaityakgfgml
    

    Sequence, based on observed residues (ATOM records): (download)
    >1d5fB (B:)
    npylrlkvrrdhiiddalvrlemiamenpadlkkqlyvefegeqgvdeggvskeffqlvv
    eeifnpdigmftydestklfwfnpssfetegqftligivlglaiynncildvhfpmvvyr
    klmgkkgtfrdlgdshpvlyqslkdlleyegnveddmmitfqisqtdlfgnpmmydlken
    gdkipitnenrkefvnlysdyilnksvekqfkafrrgfhmvtnesplkylfrpeeielli
    cgsrnldfqaleetteydggytrdsvlirefweivhsftdeqkrlflqfttgtdrapvgg
    lgklkmiiakngpdterlptshtcfnvlllpeysskeklkerllkaitya
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >1d5fC (C:)
    qlnpylrlkvrrdhiiddalvrlemiamenpadlkkqlyvefegeqgvdeggvskeffql
    vveeifnpdigmftydestklfwfnpssfetegqftligivlglaiynncildvhfpmvv
    yrklmgkkgtfrdlgdshpvlyqslkdlleyegnveddmmitfqisqtdlfgnpmmydlk
    engdkipitnenrkefvnlysdyilnksvekqfkafrrgfhmvtnesplkylfrpeeiel
    licgsrnldfqaleetteydggytrdsvlirefweivhsftdeqkrlflqfttgtdrapv
    gglgklkmiiakngpdterlptshtcfnvlllpeysskeklkerllkaityakgfgml
    

    Sequence, based on observed residues (ATOM records): (download)
    >1d5fC (C:)
    npylrlkvrrdhiiddalvrlemiamenpadlkkqlyvefegeqgvdeggvskeffqlvv
    eeifnpdigmftydestklfwfnpssfetegqftligivlglaiynncildvhfpmvvyr
    klmgkkgtfrdlgdshpvlyqslkdlleyegnveddmmitfqisqtdlfgnpmmydlken
    gdkipitnenrkefvnlysdyilnksvekqfkafrrgfhmvtnesplkylfrpeeielli
    cgsrnldfqaleetteydggytrdsvlirefweivhsftdeqkrlflqfttgtdrapvgg
    lgklkmiiakngpdterlptshtcfnvlllpeysskeklkerllkaitya