PDB entry 1d5b
View 1d5b on RCSB PDB site
Description: unliganded mature oxy-cope catalytic antibody
Class: immune system
Keywords: immune system
Deposited on
1999-10-06, released
2000-02-09
The last revision prior to the SCOPe 2.08 freeze date was dated
2017-06-21, with a file datestamp of
2017-06-16.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: N/A
AEROSPACI score: 0.14
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: chimeric OXY-COPE catalytic ANTIBODY AZ-28 (light chain)
Species: , [TaxId:9606]
Gene: IGKC
Database cross-references and differences (RAF-indexed):
- Uniprot Q7TS98 (0-106)
- conflict (33)
- conflict (50)
- conflict (95)
- conflict (99)
- Uniprot P01834 (107-210)
Domains in SCOPe 2.08: d1d5ba1, d1d5ba2 - Chain 'B':
Compound: chimeric OXY-COPE catalytic ANTIBODY AZ-28 (HEAVY chain)
Species: , [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot K7T9I5 (8-119)
- expression tag (0-7)
- conflict (31)
- conflict (56)
- conflict (58)
- conflict (73)
- conflict (98-103)
- conflict (103)
- conflict (103)
- Uniprot P0DOX5 (120-220)
Domains in SCOPe 2.08: d1d5bb1, d1d5bb2, d1d5bb3 - Chain 'H':
Compound: chimeric OXY-COPE catalytic ANTIBODY AZ-28 (HEAVY chain)
Species: , [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot K7T9I5 (8-119)
- expression tag (0-7)
- conflict (31)
- conflict (56)
- conflict (58)
- conflict (73)
- conflict (98-103)
- conflict (103)
- conflict (103)
- Uniprot P0DOX5 (120-220)
Domains in SCOPe 2.08: d1d5bh1, d1d5bh2, d1d5bh3 - Chain 'L':
Compound: chimeric OXY-COPE catalytic ANTIBODY AZ-28 (light chain)
Species: , [TaxId:9606]
Gene: IGKC
Database cross-references and differences (RAF-indexed):
- Uniprot Q7TS98 (0-106)
- conflict (33)
- conflict (50)
- conflict (95)
- conflict (99)
- Uniprot P01834 (107-210)
Domains in SCOPe 2.08: d1d5bl1, d1d5bl2 - Heterogens: CD, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1d5bA (A:)
dikmtqspssmyaslgervtitckasqdinsylnwfqqkpgkspktliyrtnrlvdgvps
rfsgsgsgqdysltissleyedmgiyyclqydefpytfgsgtkleikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnr
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1d5bB (B:)
qvqlqqsgaelmkpgasvkisckatgytfssfwiewvkqrpghglewigeilpgsggthy
nekfkgkatftadkssntaymqlssltsedsavyycarghsyyfydgdywgqgtsvtvss
astkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqss
glyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepk
- Chain 'H':
Sequence; same for both SEQRES and ATOM records: (download)
>1d5bH (H:)
qvqlqqsgaelmkpgasvkisckatgytfssfwiewvkqrpghglewigeilpgsggthy
nekfkgkatftadkssntaymqlssltsedsavyycarghsyyfydgdywgqgtsvtvss
astkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqss
glyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepk
- Chain 'L':
Sequence; same for both SEQRES and ATOM records: (download)
>1d5bL (L:)
dikmtqspssmyaslgervtitckasqdinsylnwfqqkpgkspktliyrtnrlvdgvps
rfsgsgsgqdysltissleyedmgiyyclqydefpytfgsgtkleikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnr