PDB entry 1d3u
View 1d3u on RCSB PDB site
Description: tata-binding protein/transcription factor (II)b/bre+tata-box complex from pyrococcus woesei
Class: gene regulation/DNA
Keywords: protein-DNA complex, transcription, hyperthermophile, gene regulation/DNA complex
Deposited on
1999-10-01, released
1999-11-15
The last revision prior to the SCOPe 2.08 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.206
AEROSPACI score: 0.34
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: tata-binding protein
Species: Pyrococcus woesei [TaxId:2262]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1d3ua1, d1d3ua2 - Chain 'B':
Compound: transcription initiation factor iib
Species: Pyrococcus woesei [TaxId:2262]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1d3ub1, d1d3ub2 - Chain 'C':
Compound: DNA 24-mer: bre+tata-box
- Chain 'D':
Compound: DNA 23-mer: bre+tata-box
- Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1d3uA (A:)
mvdmskvklrienivasvdlfaqldlekvldlcpnskynpeefpgiichlddpkvallif
ssgklvvtgaksvqdieravaklaqklksigvkfkrapqidvqnmvfsgdigrefnldvv
altlpnceyepeqfpgviyrvkepksvillfssgkivcsgakseadaweavrkllreldk
y
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1d3uB (B:)
mvsdaaernlafalseldritaqlklprhveeeaarlyreavrkglirgrsiesvmaacv
yaacrllkvprtldeiadiarvdkkeigrsyrfiarnlnltpkklfvkptdyvnkfadel
glsekvrrraieildeaykrgltsgkspaglvaaalyiasllegekrtqrevaevarvte
vtvrnrykelveklkikvpia
- Chain 'C':
No sequence available.
- Chain 'D':
No sequence available.