PDB entry 1d3e

View 1d3e on RCSB PDB site
Description: cryo-em structure of human rhinovirus 16 (hrv16) complexed with a two- domain fragment of its cellular receptor, intercellular adhesion molecule-1 (d1d2-icam-1). implications for virus-receptor interactions. alpha carbons only
Deposited on 1999-09-29, released 2000-01-19
The last revision prior to the SCOP 1.67 freeze date was dated 2000-01-26, with a file datestamp of 2000-01-25.
Experiment type: EM
Resolution: N/A
R-factor: N/A
AEROSPACI score: -0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain '1':
    Domains in SCOP 1.67: d1d3e1_
  • Chain '2':
    Domains in SCOP 1.67: d1d3e2_
  • Chain '3':
    Domains in SCOP 1.67: d1d3e3_
  • Chain '4':
    Domains in SCOP 1.67: d1d3e4_
  • Chain 'I':
    Domains in SCOP 1.67: d1d3ei_

PDB Chain Sequences:

  • Chain '1':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1d3e1 (1:)
apvaayvdevlnevlvvpninqshpttsnaapvldaaetghtnkiqpedtietryvqssq
tldemsvesflgrsgcihesvldivdnyndqsftkwninlqemaqirrkfemftyarfds
eitmvpsvaakdghighivmqymyvppgapipttrddyawqsgtnasvfwqhgqpfprfs
lpflsiasayymfydgydgdtyksrygtvvtndmgtlcsrivtseqlhkvkvvtriyhka
khtkawcprppravqyshthttnyklssevhndvairprtnlttv

  • Chain '2':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1d3e2 (2:)
sdriiqitrgdstitsqdvanavvgygvwphyltpqdataidkptqpdtssnrfytldsk
mwnstskgwwwklpdalkdmgifgenmfyhflgrsgytvhvqcnaskfhqgtllvvmipe
hqlatvnkgnvnagykythpgeagrevgtaaaaekqpsddnwlnfdgtllgnllifphqf
inlrsnnsatlivpyvnavpmdsmvrhnnwslviipvcqlqsnnisnivpitvsispmca
efsgaraktvvq

  • Chain '3':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1d3e3 (3:)
glpvyvtpgsgqfmttddmqspcalpwyhptkeifipgevknliemcqvdtlipinstqs
nignvsmytvtlspqtklaeeifaikvdiashplattligeiasyfthwtgslrfsfmfc
gtanttlkvllaytppgigkprsrkeamlgthvvwdvglqstvslvvpwisasqyrfttp
dtyssagyitcwyqtnfvvppntpntaemlcfvsgckdfclrmardtdlhkqtgpitq

  • Chain '4':
    Sequence, based on SEQRES records: (download) 
    >1d3e4 (4:)
gaqvsrqnvgthstqnmvsngsslnyfninyfkdaassgasrldfsqdpskftdpvkdvl
ekgiptlq

    Sequence, based on observed residues (ATOM records): (download) 
    >1d3e4 (4:)
gaqvsrqslnyfninyfkdaassgasrld

  • Chain 'I':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1d3eI (I:)
qtsvspskvilprggsvlvtcstscdqpkllgietplpkkelllpgnnrkvyelsnvqed
sqpmcysncpdgqstaktfltvywtpervelaplpswqpvgknltlrcqveggapranlt
vvllrgekelkrepavgepaevtttvlvrrdhhganfscrteldlrpqglelfentsapy
qlqtf