PDB entry 1d2f

View 1d2f on RCSB PDB site
Description: x-ray structure of maly from escherichia coli: a pyridoxal-5'-phosphate-dependent enzyme acting as a modulator in mal gene expression
Class: transferase
Keywords: aminotransferase fold, large plp-binding domain, small c-terminal domain, open alpha-beta structure.
Deposited on 1999-09-23, released 2000-01-12
The last revision prior to the SCOP 1.75 freeze date was dated 2003-04-01, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.201
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: maly protein
    Species: Escherichia coli
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1d2fa_
  • Chain 'B':
    Compound: maly protein
    Species: Escherichia coli
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1d2fb_
  • Heterogens: PLP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1d2fA (A:)
mfdfskvvdrhgtwctqwdyvadrfgtadllpftisdmdfatapciiealnqrlmhgvfg
ysrwkndeflaaiahwfstqhytaidsqtvvygpsviymvselirqwsetgegvvihtpa
ydafykaiegnqrtvmpvalekqadgwfcdmgkleavlakpeckimllcspqnptgkvwt
cdeleimadlcerhgvrvisdeihmdmvwgeqphipwsnvargdwalltsgsksfnipal
tgaygiiensssrdaylsalkgrdglsspsvlaltahiaayqqgapwldalriylkdnlt
yiadkmnaafpelnwqipqstylawldlrplniddnalqkalieqekvaimpgytygeeg
rgfvrlnagcprsklekgvaglinairavr

    Sequence, based on observed residues (ATOM records): (download) 
    >1d2fA (A:)
llpftisdmdfatapciiealnqrlmhgvfgysrwkndeflaaiahwfstqhytaidsqt
vvygpsviymvselirqwsetgegvvihtpaydafykaiegnqrtvmpvalekqadgwfc
dmgkleavlakpeckimllcspqnptgkvwtcdeleimadlcerhgvrvisdeihmdmvw
geqphipwsnvargdwalltsgsksfnipaltgaygiiensssrdaylsalkgrdglssp
svlaltahiaayqqgapwldalriylkdnltyiadkmnaafpelnwqipqstylawldlr
plniddnalqkalieqekvaimpgytygeegrgfvrlnagcprsklekgvaglinairav
r

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1d2fB (B:)
mfdfskvvdrhgtwctqwdyvadrfgtadllpftisdmdfatapciiealnqrlmhgvfg
ysrwkndeflaaiahwfstqhytaidsqtvvygpsviymvselirqwsetgegvvihtpa
ydafykaiegnqrtvmpvalekqadgwfcdmgkleavlakpeckimllcspqnptgkvwt
cdeleimadlcerhgvrvisdeihmdmvwgeqphipwsnvargdwalltsgsksfnipal
tgaygiiensssrdaylsalkgrdglsspsvlaltahiaayqqgapwldalriylkdnlt
yiadkmnaafpelnwqipqstylawldlrplniddnalqkalieqekvaimpgytygeeg
rgfvrlnagcprsklekgvaglinairavr

    Sequence, based on observed residues (ATOM records): (download) 
    >1d2fB (B:)
fdfskvvllpftisdmdfatapciiealnqrlmhgvfgysrwkndeflaaiahwfstqhy
taidsqtvvygpsviymvselirqwsetgegvvihtpaydafykaiegnqrtvmpvalek
qadgwfcdmgkleavlakpeckimllcspqnptgkvwtcdeleimadlcerhgvrvisde
ihmdmvwgeqphipwsnvargdwalltsgsksfnipaltgaygiiensssrdaylsalkg
rdglsspsvlaltahiaayqqgapwldalriylkdnltyiadkmnaafpelnwqipqsty
lawldlrplniddnalqkalieqekvaimpgytygeegrgfvrlnagcprsklekgvagl
inairavr