PDB entry 1d1i

View 1d1i on RCSB PDB site
Description: mutated shiga-like toxin b subunit (w34a) complexed with receptor gb3 analogue
Class: toxin
Keywords: toxin, receptor binding, protein-carbohydrate recognition, ob-fold
Deposited on 1999-09-17, released 2000-09-20
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: N/A
AEROSPACI score: 0.48 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: shiga toxin b-chain
  Species: Escherichia coli [TaxId:562]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P08027
    • engineered (33)
  Domains in SCOPe 2.08: d1d1ia_
• Chain 'B':
  Compound: shiga toxin b-chain
  Species: Escherichia coli [TaxId:562]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P08027
    • engineered (33)
  Domains in SCOPe 2.08: d1d1ib_
• Chain 'C':
  Compound: shiga toxin b-chain
  Species: Escherichia coli [TaxId:562]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P08027
    • engineered (33)
  Domains in SCOPe 2.08: d1d1ic_
• Chain 'D':
  Compound: shiga toxin b-chain
  Species: Escherichia coli [TaxId:562]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P08027
    • engineered (33)
  Domains in SCOPe 2.08: d1d1id_
• Chain 'E':
  Compound: shiga toxin b-chain
  Species: Escherichia coli [TaxId:562]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P08027 (0-68)
    • engineered (33)
  Domains in SCOPe 2.08: d1d1ie_
• Heterogens: HOH

PDB Chain Sequences:

• Chain 'A':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >1d1iA (A:)
  tpdcvtgkveytkyndddtftvkvgdkelftnranlqslllsaqitgmtvtiktnachng
  ggfsevifr
  

  
  
• Chain 'B':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >1d1iB (B:)
  tpdcvtgkveytkyndddtftvkvgdkelftnranlqslllsaqitgmtvtiktnachng
  ggfsevifr
  

  
  
• Chain 'C':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >1d1iC (C:)
  tpdcvtgkveytkyndddtftvkvgdkelftnranlqslllsaqitgmtvtiktnachng
  ggfsevifr
  

  
  
• Chain 'D':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >1d1iD (D:)
  tpdcvtgkveytkyndddtftvkvgdkelftnranlqslllsaqitgmtvtiktnachng
  ggfsevifr
  

  
  
• Chain 'E':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >1d1iE (E:)
  tpdcvtgkveytkyndddtftvkvgdkelftnranlqslllsaqitgmtvtiktnachng
  ggfsevifr