PDB entry 1cov

View 1cov on RCSB PDB site
Description: coxsackievirus b3 coat protein
Class: Virus
Keywords: COXSACKIEVIRUS B3, Icosahedral virus, Virus
Deposited on 1994-10-19, released 1996-03-08
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-08-10, with a file datestamp of 2011-08-05.
Experiment type: XRAY
Resolution: 3.5 Å
R-factor: 0.264
AEROSPACI score: 0.13 (click here for full SPACI score report)

Chains and heterogens:

  • Chain '1':
    Compound: coxsackievirus coat protein
    Species: Human coxsackievirus B3 [TaxId:12072]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1cov1_
  • Chain '2':
    Compound: coxsackievirus coat protein
    Species: Human coxsackievirus B3 [TaxId:12072]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q66282 (Start-262)
      • conflict (150)
      • conflict (244)
    Domains in SCOPe 2.08: d1cov.1
  • Chain '3':
    Compound: coxsackievirus coat protein
    Species: Human coxsackievirus B3 [TaxId:12072]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q66282 (0-237)
      • conflict (233)
    Domains in SCOPe 2.08: d1cov3_
  • Chain '4':
    Compound: coxsackievirus coat protein
    Species: Human coxsackievirus B3 [TaxId:12072]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1cov.1
  • Heterogens: MYR, PLM

PDB Chain Sequences:

  • Chain '1':
    Sequence, based on SEQRES records: (download) 
    >1cov1 (1:)
gpvedaitaaigrvadtvgtgptnseaipaltaaetghtsqvvpsdtmqtrhvknyhsrs
estienflcrsacvyfteyensgakryaewvitprqaaqlrrklefftyvrfdleltfvi
tstqqpsttqnqdaqilthqimyvppggpvpdkvdsyvwqtstnpsvfwtegnapprmsv
pflsignaysnfydgwsefsrngvygintlnnmgtlyarhvnagstgpikstiriyfkpk
hvkawiprpprlcqyekaknvnfqpsgvtttrqsittmtnt

    Sequence, based on observed residues (ATOM records): (download) 
    >1cov1 (1:)
rvadtvgtgptnseaipaltaaetghtsqvvpsdtmqtrhvknyhsrsestienflcrsa
cvyfteyensgakryaewvitprqaaqlrrklefftyvrfdleltfvitstqqpsttqnq
daqilthqimyvppggpvpdkvdsyvwqtstnpsvfwtegnapprmsvpflsignaysnf
ydgwsefsrngvygintlnnmgtlyarhvnagstgpikstiriyfkpkhvkawiprpprl
cqyekaknvnfqpsgvtttrqsittmtnt

  • Chain '2':
    Sequence, based on SEQRES records: (download) 
    >1cov2 (2:)
sptveecgysdrvrsitlgnstittqecanvvvgygvwpdylkdseataedqptqpdvat
crfytldsvqwqktspgwwwklpdalsnlglfgqnmqyhylgrtgytihvqcnaskfhqg
cllvvcvpeaemgcatlnntpssaellggdtakefadkpvasgsnklvqrvvynagmgvg
vgnltifphqwinlrtnnsativmpytnsvpmdnmfrhnnvtlmvipfvpldycpgstty
vpitvtiapmcaeynglrlaghq

    Sequence, based on observed residues (ATOM records): (download) 
    >1cov2 (2:)
gysdrvrsitlgnstittqecanvvvgygvwpdylkdseataedqptqpdvatcrfytld
svqwqktspgwwwklpdalsnlglfgqnmqyhylgrtgytihvqcnaskfhqgcllvvcv
peaemgcatlnntpssaellggdtakefadkpvasgsnklvqrvvynagmgvgvgnltif
phqwinlrtnnsativmpytnsvpmdnmfrhnnvtlmvipfvpldycpgsttyvpitvti
apmcaeynglrlaghq

  • Chain '3':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1cov3 (3:)
glptmntpgscqfltsddfqspsampqydvtpemripgevknlmeiaevdsvvpvqnvge
kvnsmeayqipvrsnegsgtqvfgfplqpgyssvfsrtllgeilnyythwsgsikltfmf
cgsamatgkfllaysppgagaptkrvdamlgthvvwdvglqsscvlcipwisqthyryva
sdeytaggfitcwyqtnivvpadaqsscyimcfvsacndfsvrllkdtpfisqenffq

  • Chain '4':
    Sequence, based on SEQRES records: (download) 
    >1cov4 (4:)
gaqvstqktgahetglnasgnsiihytninyykdaasnsanrqdftqdpskftepvkdim
ikslpaln

    Sequence, based on observed residues (ATOM records): (download) 
    >1cov4 (4:)
gaqvstqktgihytninyykdaasnsanrqdftqdpskftepvkdimikslpaln