PDB entry 1cm9

View 1cm9 on RCSB PDB site
Description: crystal structure of viral macrophage inflammatory protein-II
Class: chemokine
Keywords: chemokine, herpesvirus-8, karposi's sarcoma
Deposited on 1999-05-19, released 1999-06-24
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-11-16, with a file datestamp of 2011-11-11.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.24
AEROSPACI score: 0.36 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: protein (viral macrophage inflammatory protein-II)
    Species: Human herpesvirus 8 [TaxId:37296]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1cm9a_
  • Chain 'B':
    Compound: protein (viral macrophage inflammatory protein-II)
    Species: Human herpesvirus 8 [TaxId:37296]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1cm9b_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1cm9A (A:)
gdtlgaswhrpdkcclgyqkrplpqvllsswyptsqlcskpgvifltkrgrqvcadkskd
wvkklmqqlpvtar

    Sequence, based on observed residues (ATOM records): (download) 
    >1cm9A (A:)
swhrpdkcclgyqkrplpqvllsswyptsqlcskpgvifltkrgrqvcadkskdwvkklm
qqlpvtar

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1cm9B (B:)
gdtlgaswhrpdkcclgyqkrplpqvllsswyptsqlcskpgvifltkrgrqvcadkskd
wvkklmqqlpvtar

    Sequence, based on observed residues (ATOM records): (download) 
    >1cm9B (B:)
whrpdkcclgyqkrplpqvllsswyptsqlcskpgvifltkrgrqvcadkskdwvkklmq
qlpvtar