PDB entry 1ckm

View 1ckm on RCSB PDB site
Description: structure of two different conformations of mRNA capping enzyme in complex with GTP
Class: capping enzyme
Keywords: mRNA, capping enzyme, nucleotidyltransferase
Deposited on 1997-04-20, released 1997-07-07
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.218
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: mRNA capping enzyme
    Species: Paramecium bursaria Chlorella virus 1 [TaxId:10506]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1ckma1, d1ckma2
  • Chain 'B':
    Compound: mRNA capping enzyme
    Species: Paramecium bursaria Chlorella virus 1 [TaxId:10506]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1ckmb1, d1ckmb2
  • Heterogens: GTP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1ckmA (A:)
mvpptintgknitteravltlnglqiklhkvvgesrddivakmkdlamddhkfprlpgpn
pvsierkdfeklkqnkyvvsektdgirfmmfftrvfgfkvctiidramtvyllpfknipr
vlfqgsifdgelcvdivekkfafvlfdavvvsgvtvsqmdlasrffamkrslkefknvpe
dpailrykewiplehptiikdhlkkanaiyhtdgliimsvdepviygrnfnlfklkpgth
htidfiimsedgtigifdpnlrknvpvgkldgyynkgsivecgfadgtwkyiqgrsdknq
andrltyektllnieenitidelldlfkwe

    Sequence, based on observed residues (ATOM records): (download) 
    >1ckmA (A:)
nitteravltlnglqiklhkvvgesrddivakmkdlamddhkfprlpgpnpvsierkdfe
klkqnkyvvsektdgirfmmfftrvfgfkvctiidramtvyllpfkniprvlfqgsifdg
elcvdivekkfafvlfdavvvsgvtvsqmdlasrffamkrslkefknvpedpailrykew
iplehptiikdhlkkanaiyhtdgliimsvdepviygrnfnlfklkpgthhtidfiimse
dgtigifdpnlrknvpvgkldgyynkgsivecgfadgtwkyiqgrsdknqandrltyekt
llnieenitidelldlf

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1ckmB (B:)
mvpptintgknitteravltlnglqiklhkvvgesrddivakmkdlamddhkfprlpgpn
pvsierkdfeklkqnkyvvsektdgirfmmfftrvfgfkvctiidramtvyllpfknipr
vlfqgsifdgelcvdivekkfafvlfdavvvsgvtvsqmdlasrffamkrslkefknvpe
dpailrykewiplehptiikdhlkkanaiyhtdgliimsvdepviygrnfnlfklkpgth
htidfiimsedgtigifdpnlrknvpvgkldgyynkgsivecgfadgtwkyiqgrsdknq
andrltyektllnieenitidelldlfkwe

    Sequence, based on observed residues (ATOM records): (download) 
    >1ckmB (B:)
nitteravltlnglqiklhkvvgesrddivakmkdlamddhkfprlpgpnpvsierkdfe
klkqnkyvvsektdgirfmmfftrvfgfkvctiidramtvyllpfkniprvlfqgsifdg
elcvdivekkfafvlfdavvvsgvtvsqmdlasrffamkrslkefknvpedpailrykew
iplehptiikdhlkkanaiyhtdgliimsvdepviygrnfnlfklkpgthhtidfiimse
dgtigifdpnlrknvpvgkldgyynkgsivecgfadgtwkyiqgrsdknqandrltyekt
llnieenitidelldlf