PDB entry 1cjd

View 1cjd on RCSB PDB site
Description: the bacteriophage prd1 coat protein, p3, is structurally similar to human adenovirus hexon
Class: viral protein
Keywords: BACTERIOPHAGE PRD1, COAT PROTEIN, JELLY ROLL, Viral protein
Deposited on 1999-04-12, released 1999-09-20
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-11-27, with a file datestamp of 2019-11-22.
Experiment type: XRAY
Resolution: 1.85 Å
R-factor: N/A
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: protein (major capsid protein (p3))
    Species: Enterobacteria phage PRD1 [TaxId:10658]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1cjda1, d1cjda2
  • Chain 'B':
    Compound: protein (major capsid protein (p3))
    Species: Enterobacteria phage PRD1 [TaxId:10658]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1cjdb1, d1cjdb2
  • Chain 'C':
    Compound: protein (major capsid protein (p3))
    Species: Enterobacteria phage PRD1 [TaxId:10658]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1cjdc1, d1cjdc2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1cjdA (A:)
aqvqqltpaqqaalrnqqamaanlqarqivlqqsypviqqvetqtfdpanrsvfdvtpan
vgivkgflvkvtaaitnnhateavaltdfgpanlvqrviyydpdnqrhtetsgwhlhfvn
takqgapflssmvtdspikygdvmnvidapatiaagatgeltmyywvplaysetdltgav
lanvpqskqrlklefannntafaavganpleaiyqgagaadcefeeisytvyqsyldqlp
vgqngyilplidlstlynlensaqagltpnvdfvvqyanlyrylstiavfdnggsfnagt
dinylsqrtanfsdtrkldpktwaaqtrrriatdfpkgvyycdnrdkpiytlqygnvgfv
vnpktvnqnarllmgyeyftsrtelvnagtistt

    Sequence, based on observed residues (ATOM records): (download) 
    >1cjdA (A:)
lrnqqamaanlqarqivlqqsypviqqvetqtfdpanrsvfdvtpanvgivkgflvkvta
aitnnhateavaltdfgpanlvqrviyydpdnqrhtetsgwhlhfvntakqgapflssmv
tdspikygdvmnvidapatiaagatgeltmyywvplaysetdltgavlanvpqskqrlkl
efannntafaavganpleaiyqgagaadcefeeisytvyqsyldqlpvgqngyilplidl
stlynlensaqagltpnvdfvvqyanlyrylstiavfdnggsfnagtdinylsqrtanfs
dtrkldpktwaaqtrrriatdfpkgvyycdnrdkpiytlqygnvgfvvnpktvnqnarll
mgyeyftsr

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1cjdB (B:)
aqvqqltpaqqaalrnqqamaanlqarqivlqqsypviqqvetqtfdpanrsvfdvtpan
vgivkgflvkvtaaitnnhateavaltdfgpanlvqrviyydpdnqrhtetsgwhlhfvn
takqgapflssmvtdspikygdvmnvidapatiaagatgeltmyywvplaysetdltgav
lanvpqskqrlklefannntafaavganpleaiyqgagaadcefeeisytvyqsyldqlp
vgqngyilplidlstlynlensaqagltpnvdfvvqyanlyrylstiavfdnggsfnagt
dinylsqrtanfsdtrkldpktwaaqtrrriatdfpkgvyycdnrdkpiytlqygnvgfv
vnpktvnqnarllmgyeyftsrtelvnagtistt

    Sequence, based on observed residues (ATOM records): (download) 
    >1cjdB (B:)
aalrnqqamaanlqarqivlqqsypviqqvetqtfdpanrsvfdvtpanvgivkgflvkv
taaitnnhateavaltdfgpanlvqrviyydpdnqrhtetsgwhlhfvntakqgapflss
mvtdspikygdvmnvidapatiaagatgeltmyywvplaysetdltgavlanvpqskqrl
klefannntafaavganpleaiyqgagaadcefeeisytvyqsyldqlpvgqngyilpli
dlstlynlensaqagltpnvdfvvqyanlyrylstiavfdnggsfnagtdinylsqrtan
fsdtrkldpktwaaqtrrriatdfpkgvyycdnrdkpiytlqygnvgfvvnpktvnqnar
llmgyeyftsrt

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1cjdC (C:)
aqvqqltpaqqaalrnqqamaanlqarqivlqqsypviqqvetqtfdpanrsvfdvtpan
vgivkgflvkvtaaitnnhateavaltdfgpanlvqrviyydpdnqrhtetsgwhlhfvn
takqgapflssmvtdspikygdvmnvidapatiaagatgeltmyywvplaysetdltgav
lanvpqskqrlklefannntafaavganpleaiyqgagaadcefeeisytvyqsyldqlp
vgqngyilplidlstlynlensaqagltpnvdfvvqyanlyrylstiavfdnggsfnagt
dinylsqrtanfsdtrkldpktwaaqtrrriatdfpkgvyycdnrdkpiytlqygnvgfv
vnpktvnqnarllmgyeyftsrtelvnagtistt

    Sequence, based on observed residues (ATOM records): (download) 
    >1cjdC (C:)
rnqqamaanlqarqivlqqsypviqqvetqtfdpanrsvfdvtpanvgivkgflvkvtaa
itnnhateavaltdfgpanlvqrviyydpdnqrhtetsgwhlhfvntakqgapflssmvt
dspikygdvmnvidapatiaagatgeltmyywvplaysetdltgavlanvpqskqrlkle
fannntafaavganpleaiyqgagaadcefeeisytvyqsyldqlpvgqyilplidlstl
ynlensaqagltpnvdfvvqyanlyrylstiavfdnggsfnagtdinylsqrtanfsdtr
kldpktwaaqtrrriatdfpkgvyycdnrdkpiytlqygnvgfvvnpktvnqnarllmgy
eyftsrt