PDB entry 1cf6

View 1cf6 on RCSB PDB site
Description: structure of DNA polymerase beta/DNA template-primer/utp phosphonate intermediate complex--potential insight into the molecular basis of fidelity
Class: transferase/DNA
Keywords: REPLICATION, CRYSTALLOGRAPHY, 3-D STRUCTURE, transferase/DNA
Deposited on 1999-03-24, released 2000-03-06
The last revision prior to the SCOPe 2.07 freeze date was dated 2001-04-23, with a file datestamp of 2007-04-25.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: 0.213
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: protein (DNA polymerase beta)
    Species: Rattus norvegicus
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1cf6a3, d1cf6a4, d1cf6a5
  • Chain 'B':
    Compound: protein (DNA polymerase beta)
    Species: Rattus norvegicus
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1cf6b3, d1cf6b4, d1cf6b5
  • Chain 'C':
    Compound: DNA (5'-d(p*ap*gp*gp*cp*gp*tp*cp*g)-3')
  • Chain 'D':
    Compound: DNA (5'-d(p*cp*gp*ap*cp*gp*cp*c)-3')
  • Chain 'P':
    Compound: DNA (5'-d(p*cp*gp*ap*cp*gp*cp*c)-3')
  • Chain 'T':
    Compound: DNA (5'-d(p*ap*gp*gp*cp*gp*tp*cp*g)-3')
  • Heterogens: CR, UCP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1cf6A (A:)
tlnggitdmlvelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtki
aekideflatgklrklekirqddtsssinfltrvtgigpsaarklvdegiktledlrkne
dklnhhqriglkyfedfekripreemlqmqdivlnevkkldpeyiatvcgsfrrgaessg
dmdvllthpnftsesskqpkllhrvveqlqkvrfitdtlskgetkfmgvcqlpsendene
yphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvage
plpvdseqdifdyiqwryrepkdrs

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1cf6B (B:)
tlnggitdmlvelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtki
aekideflatgklrklekirqddtsssinfltrvtgigpsaarklvdegiktledlrkne
dklnhhqriglkyfedfekripreemlqmqdivlnevkkldpeyiatvcgsfrrgaessg
dmdvllthpnftsesskqpkllhrvveqlqkvrfitdtlskgetkfmgvcqlpsendene
yphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvage
plpvdseqdifdyiqwryrepkdrs

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.

  • Chain 'P':
    No sequence available.

  • Chain 'T':
    No sequence available.