PDB entry 1cc1

View 1cc1 on RCSB PDB site
Description: crystal structure of a reduced, active form of the ni-fe-se hydrogenase from desulfomicrobium baculatum
Class: oxidoreductase
Keywords: ni-fe-se hydrogenase, oxidoreductase
Deposited on 1999-03-03, released 1999-06-01
The last revision prior to the SCOPe 2.07 freeze date was dated 2014-08-06, with a file datestamp of 2014-08-01.
Experiment type: XRAY
Resolution: 2.15 Å
R-factor: 0.194
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'L':
    Compound: hydrogenase (large subunit)
    Species: Desulfomicrobium baculatum [TaxId:899]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P13065 (Start-497)
      • conflict (380)
    Domains in SCOPe 2.07: d1cc1l_
  • Chain 'S':
    Compound: hydrogenase (small subunit)
    Species: Desulfomicrobium baculatum [TaxId:899]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P13063 (Start-282)
      • conflict (98)
    Domains in SCOPe 2.07: d1cc1s_
  • Heterogens: NI, FE2, SF4, FCO, H2S, HOH

PDB Chain Sequences:

  • Chain 'L':
    Sequence, based on SEQRES records: (download)
    >1cc1L (L:)
    sqaatpaadgkvkisidpltrveghlkievevkdgkvvdakcsggmfrgfeqilrgrdpr
    dssqivqricgvcptahctasvmaqddafgvkvttngritrnlifganylqshilhfyhl
    aaldyvkgpdvspfvpryanadlltdrikdgakadatntyglnqylkaleirrichemva
    mfggrmphvqgmvvggateiptadkvaeyaarfkevqkfvieeylpliytlgsvytdlfe
    tgigwknviafgvfpedddyktfllkpgvyidgkdeefdsklvkeyvghsffdhsapggl
    hysvgetnpnpdkpgaysfvkaprykdkpcevgplarmwvqnpelspvgqkllkelygie
    akkfrdlgdkafsimgrhvlraeetwltavavekwlkqvqpgaetyvkseipdaaegtgf
    teaprgallhylkikdkkienyqivsatlwnanprddmgqrgpieealigvpvpdiknpv
    nvgrlvrsydpalgcavh
    

    Sequence, based on observed residues (ATOM records): (download)
    >1cc1L (L:)
    vkisidpltrveghlkievevkdgkvvdakcsggmfrgfeqilrgrdprdssqivqricg
    vcptahctasvmaqddafgvkvttngritrnlifganylqshilhfyhlaaldyvkgpdv
    spfvpryanadlltdrikdgakadatntyglnqylkaleirrichemvamfggrmphvqg
    mvvggateiptadkvaeyaarfkevqkfvieeylpliytlgsvytdlfetgigwknviaf
    gvfpedddyktfllkpgvyidgkdeefdsklvkeyvghsffdhsapgglhysvgetnpnp
    dkpgaysfvkaprykdkpcevgplarmwvqnpelspvgqkllkelygieakkfrdlgdka
    fsimgrhvlraeetwltavavekwlkqvqpgaetyvkseipdaaegtgfteaprgallhy
    lkikdkkienyqivsatlwnanprddmgqrgpieealigvpvpdiknpvnvgrlvrsydp
    algcavh
    

  • Chain 'S':
    Sequence, based on SEQRES records: (download)
    >1cc1S (S:)
    mtegakkapviwvqgqgctgcsvsllnavhprikeilldvislefhptvmasegemalah
    myeiaekfngnffllvegaiptakegrycivgetldakahhhevtmmelirdlapkslat
    vavgtcsayggipaaegnvtgsksvrdffadekiekllvnvpgcpphpdwmvgtlvaaws
    hvlnptehplpeldddgrpllffgdnihencpyldkydnsefaetftkpgckaelgckgp
    styadcakrrwnnginwcvenavcigcvepdfpdgkspfyvae
    

    Sequence, based on observed residues (ATOM records): (download)
    >1cc1S (S:)
    kkapviwvqgqgctgcsvsllnavhprikeilldvislefhptvmasegemalahmyeia
    ekfngnffllvegaiptakegrycivgeakahhhevtmmelirdlapkslatvavgtcsa
    yggipaaegnvtgsksvrdffadekiekllvnvpgcpphpdwmvgtlvaawshvlnpteh
    plpeldddgrpllffgdnihencpyldkydnsefaetftkpgckaelgckgpstyadcak
    rrwnnginwcvenavcigcvepdfpdgkspfyvae