PDB entry 1c8n

View 1c8n on RCSB PDB site
Description: tobacco necrosis virus
Class: Virus
Keywords: VIRUS, Icosahedral virus
Deposited on 2000-05-20, released 2000-08-30
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.25 Å
R-factor: 0.253
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: coat protein
    Species: unidentified tobacco necrosis virus [TaxId:12054]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1c8na_
  • Chain 'B':
    Compound: coat protein
    Species: unidentified tobacco necrosis virus [TaxId:12054]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1c8nb_
  • Chain 'C':
    Compound: coat protein
    Species: unidentified tobacco necrosis virus [TaxId:12054]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1c8nc_
  • Heterogens: CA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1c8nA (A:)
anindkrvmkeangifveqrwngkrwvteaswragqapnkeraatvtksiarkvrggvsr
aggfvtapvigamvtrptvprfgmrgnstvvsnselilnltpialaytvqslpliatqpa
wlgtiadnyskwrwvslriiyspkcptttsgtvamclsydrndvapgsrvqlsqtykain
fppyagydgaailntdvtptsaiyvdvdvtrfdkawystigtaafaaltafdqnqfcpct
vhigsdggpavavppgdiffkyvieliepinptmnv

    Sequence, based on observed residues (ATOM records): (download) 
    >1c8nA (A:)
nstvvsnselilnltpialaytvqslpliatqpawlgtiadnyskwrwvslriiyspkcp
tttsgtvamclsydrndvapgsrvqlsqtykainfppyagydgaailntdvtptsaiyvd
vdvtrfdkawystigtaafaaltafdqnqfcpctvhigsdggpavavppgdiffkyviel
iepinptmn

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1c8nB (B:)
anindkrvmkeangifveqrwngkrwvteaswragqapnkeraatvtksiarkvrggvsr
aggfvtapvigamvtrptvprfgmrgnstvvsnselilnltpialaytvqslpliatqpa
wlgtiadnyskwrwvslriiyspkcptttsgtvamclsydrndvapgsrvqlsqtykain
fppyagydgaailntdvtptsaiyvdvdvtrfdkawystigtaafaaltafdqnqfcpct
vhigsdggpavavppgdiffkyvieliepinptmnv

    Sequence, based on observed residues (ATOM records): (download) 
    >1c8nB (B:)
stvvsnselilnltpialaytvqslpliatqpawlgtiadnyskwrwvslriiyspkcpt
ttsgtvamclsydrndvapgsrvqlsqtykainfppyagydgaailntdvtptsaiyvdv
dvtrfdkawystigtaafaaltafdqnqfcpctvhigsdggpavavppgdiffkyvieli
epinptmnv

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1c8nC (C:)
anindkrvmkeangifveqrwngkrwvteaswragqapnkeraatvtksiarkvrggvsr
aggfvtapvigamvtrptvprfgmrgnstvvsnselilnltpialaytvqslpliatqpa
wlgtiadnyskwrwvslriiyspkcptttsgtvamclsydrndvapgsrvqlsqtykain
fppyagydgaailntdvtptsaiyvdvdvtrfdkawystigtaafaaltafdqnqfcpct
vhigsdggpavavppgdiffkyvieliepinptmnv

    Sequence, based on observed residues (ATOM records): (download) 
    >1c8nC (C:)
gvsraggfvtapvigamvtrptvprfgmrgnstvvsnselilnltpialaytvqslplia
tqpawlgtiadnyskwrwvslriiyspkcptttsgtvamclsydrndvapgsrvqlsqty
kainfppyagydgaailntdvtptsaiyvdvdvtrfdkawystigtaafaaltafdqnqf
cpctvhigsdggpavavppgdiffkyvieliepinptmn