PDB entry 1c8f

View 1c8f on RCSB PDB site
Description: feline panleukopenia virus empty capsid structure
Class: virus
Keywords: beta barrel, viral capsid, icosahedral symmetry, Icosahedral virus, Virus
Deposited on 2000-05-05, released 2000-08-09
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-10-04, with a file datestamp of 2017-09-29.
Experiment type: XRAY
Resolution: 3 Å
R-factor: N/A
AEROSPACI score: 0.12 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: feline panleukopenia virus capsid
    Species: Feline panleukopenia virus [TaxId:10786]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P24840 (0-547)
      • conflict (64)
      • conflict (67)
      • conflict (195)
      • conflict (447)
      • conflict (472)
      • conflict (525)
    Domains in SCOPe 2.07: d1c8fa_
  • Heterogens: CA

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1c8fA (A:)
    gvgistgtfnnqtefkflengwveitanssrlvhlnmpesenykrvvvnnmdktavkgnm
    alddihveivtpwslvdanawgvwfnpgdwqlivntmselhlvsfeqeifnvvlktvses
    atqpptkvynndltaslmvaldsnntmpftpaamrsetlgfypwkptiptpwryyfqwdr
    tlipshtgtsgtptnvyhgtdpddvqfytiensvpvhllrtgdefatgtfffdckpcrlt
    htwqtnralglppflnslpqsegatnfgdigvqqdkrrgvtqmgntdyiteatimrpaev
    gysapyysfeastqgpfktpiaagrggaqtdenqaadgdpryafgrqhgqkttttgetpe
    rftyiahqdtgrypegdwiqninfnlpvtndnvllptdpiggktginytnifntygplta
    lnnvppvypngqiwdkefdtdlkprlhinapfvcqnncpgqlfvkvapnltnqydpdasa
    nmsrivtysdfwwkgklvfkaklrashtwnpiqqmsinvdnqfnyvpnnigamkivyeks
    qlaprkly