PDB entry 1c5d

View 1c5d on RCSB PDB site
Description: the crystal structure of the fab fragment of a rat monoclonal antibody against the main immunogenic region of the human muscle acetylcholine receptor
Class: immune system
Keywords: immunoglobulin, immune system
Deposited on 1999-11-17, released 1999-12-03
The last revision prior to the SCOPe 2.01 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.196
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: monoclonal antibody against the main immunogenic region of the human muscle acetylcholine receptor
    Species: Rattus norvegicus [TaxId:10116]
    Database cross-references and differences (RAF-indexed):
    • PDB 1C5D (0-212)
    Domains in SCOPe 2.01: d1c5da1, d1c5da2
  • Chain 'B':
    Compound: monoclonal antibody against the main immunogenic region of the human muscle acetylcholine receptor
    Species: Rattus norvegicus [TaxId:10116]
    Database cross-references and differences (RAF-indexed):
    • PDB 1C5D (0-214)
    Domains in SCOPe 2.01: d1c5db1, d1c5db2
  • Chain 'H':
    Compound: monoclonal antibody against the main immunogenic region of the human muscle acetylcholine receptor
    Species: Rattus norvegicus [TaxId:10116]
    Database cross-references and differences (RAF-indexed):
    • PDB 1C5D (0-End)
    Domains in SCOPe 2.01: d1c5dh1, d1c5dh2
  • Chain 'L':
    Compound: monoclonal antibody against the main immunogenic region of the human muscle acetylcholine receptor
    Species: Rattus norvegicus [TaxId:10116]
    Database cross-references and differences (RAF-indexed):
    • PDB 1C5D (0-212)
    Domains in SCOPe 2.01: d1c5dl1, d1c5dl2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1c5dA (A:)
diqmtqsppslsaslgdkvtitcqasqdinkyiawyqqkpgkaprqlirytsilvlgtps
rfsgsgsgrdfsfsisnvasediasyyclqygnlytfgagtkleikradaaptvsifpps
teqlatggasvvclmnnfyprdisvkwkidgterrdgvldsvtdqdskdstysmsstlsl
tkadyeshnlytcevvhktssspvvksfnrnec

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1c5dB (B:)
evkllesgpglvqpsqtlsltctvsgfplttngvswvrqppgkglewiaaissggspyyn
salksrlsinrdtsksqvflkmnslqtedtaiyfctredgwnyfdywgpgtmvtvssaqt
tapsvyplapgcgdttsstvtlgclvkgyfpepvtvtwnsgalssdvhtfpavlqsglyt
ltssvtsstwpsqtvtcnvahpasstkvdkklerr

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >1c5dH (H:)
evkllesgpglvqpsqtlsltctvsgfplttngvswvrqppgkglewiaaissggspyyn
salksrlsinrdtsksqvflkmnslqtedtaiyfctredgwnyfdywgpgtmvtvssaqt
tapsvyplapgcgdttsstvtlgclvkgyfpepvtvtwnsgalssdvhtfpavlqsglyt
ltssvtsstwpsqtvtcnvahpasstkvdkklerr

    Sequence, based on observed residues (ATOM records): (download) 
    >1c5dH (H:)
evkllesgpglvqpsqtlsltctvsgfplttngvswvrqppgkglewiaaissggspyyn
salksrlsinrdtsksqvflkmnslqtedtaiyfctredgwnyfdywgpgtmvtvssaqt
tapsvyplapgcgdttsstvtlgclvkgyfpepvtvtwnsgalssdvhtfpavlqsglyt
ltssvtsstwpsqtvtcnvahpasstkvdkkler

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1c5dL (L:)
diqmtqsppslsaslgdkvtitcqasqdinkyiawyqqkpgkaprqlirytsilvlgtps
rfsgsgsgrdfsfsisnvasediasyyclqygnlytfgagtkleikradaaptvsifpps
teqlatggasvvclmnnfyprdisvkwkidgterrdgvldsvtdqdskdstysmsstlsl
tkadyeshnlytcevvhktssspvvksfnrnec