PDB entry 1c1a

View 1c1a on RCSB PDB site
Description: crystal structure of rsv two-domain integrase
Class: Viral protein
Keywords: INTEGRASE, ROUS SARCOMA VIRUS, HIV, VIRUS/VIRAL PROTEIN, Viral protein
Deposited on 1999-07-21, released 2000-03-01
The last revision prior to the SCOPe 2.08 freeze date was dated 2012-02-29, with a file datestamp of 2012-02-24.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: 0.256
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: rsv integrase
    Species: Rous sarcoma virus [TaxId:11886]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03354
      • engineered (150)
    Domains in SCOPe 2.08: d1c1aa1, d1c1aa2
  • Chain 'B':
    Compound: rsv integrase
    Species: Rous sarcoma virus [TaxId:11886]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03354
      • engineered (150)
    Domains in SCOPe 2.08: d1c1ab1, d1c1ab2

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1c1aA (A:)
gvnprglgplqiwqtdftleprmaprswlavtvdtassaivvtqhgrvtsvavqhhwata
iavlgrpkaiktdngscftskstrewlarwgiahttgipgnsqgqamveranrllkdrir
vlaegdgfmkriptskqgellakamyalnhkergentktpiqkhwrptvltegppvkiri
etgewekgwnvlvwgrgyaavknrdtdkviwvpsrkvkpditqkdevtkkdeasplfa

    Sequence, based on observed residues (ATOM records): (download) 
    >1c1aA (A:)
prglgplqiwqtdftleprmaprswlavtvdtassaivvtqhgrvtsvavqhhwataiav
lgrpkaiktdngscftskstrewlarwgiahttgipgnsqgqamveranrllkdrirvla
egdgfmkriptskqgellakamyalnhkergentktpiqkhwrptvltegppvkirietg
ewekgwnvlvwgrgyaavknrdtdkviwvpsrkvkpditqk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1c1aB (B:)
gvnprglgplqiwqtdftleprmaprswlavtvdtassaivvtqhgrvtsvavqhhwata
iavlgrpkaiktdngscftskstrewlarwgiahttgipgnsqgqamveranrllkdrir
vlaegdgfmkriptskqgellakamyalnhkergentktpiqkhwrptvltegppvkiri
etgewekgwnvlvwgrgyaavknrdtdkviwvpsrkvkpditqkdevtkkdeasplfa

    Sequence, based on observed residues (ATOM records): (download) 
    >1c1aB (B:)
lgplqiwqtdftleprmaprswlavtvdtassaivvtqhgrvtsvavqhhwataiavlgr
pkaiktdngscftskstrewlarwgiahttgipgnsqgqamveranrllkdrirvlaegd
gfmkriptskqgellakamyalnhkertpiqkhwrptvltegppvkirietgewekgwnv
lvwgrgyaavknrdtdkviwvpsrkvkpd