PDB entry 1bpd

View 1bpd on RCSB PDB site
Description: crystal structure of rat DNA polymerase beta: evidence for a common polymerase mechanism
Class: nucleotidyltransferase
Keywords: nucleotidyltransferase
Deposited on 1994-04-12, released 1994-06-22
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 3.6 Å
R-factor: 0.193
AEROSPACI score: 0.14 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA polymerase beta
    Species: Rattus norvegicus [TaxId:10116]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1bpda1, d1bpda2, d1bpda3
  • Heterogens: PO4

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1bpdA (A:)
    mskrkapqetlnggitdmlvelanfeknvsqaihkynayrkaasviakyphkiksgaeak
    klpgvgtkiaekideflatgklrklekirqddtsssinfltrvtgigpsaarklvdegik
    tledlrknedklnhhqriglkyfedfekripreemlqmqdivlnevkkldpeyiatvcgs
    frrgaessgdmdvllthpnftsesskqpkllhrvveqlqkvrfitdtlskgetkfmgvcq
    lpsendeneyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirp
    lgvtgvageplpvdseqdifdyiqwryrepkdrse
    

    Sequence, based on observed residues (ATOM records): (download)
    >1bpdA (A:)
    etlnggitdmlvelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtk
    iaekideflatgklrklekirqddtsssinfltrvtgigpsaarklvdegiktledlrkn
    edklnhhqriglkyfedfekripreemlqmqdivlnevkkldpeyiatvcgsfrrgaess
    gdmdvllthpnftsesskqpkllhrvveqlqkvrfitdtlskgetkfmgvcqlpseneyp
    hrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvagepl
    pvdseqdifdyiqwryrepkdrse