PDB entry 1bp7

View 1bp7 on RCSB PDB site
Description: group I mobile intron endonuclease I-crei complexed with homing site DNA
Class: transcription/DNA
Keywords: endonuclease, group I mobile intron, intron homing, chloroplast DNA, laglidadg motif, DNA complex, transcription/DNA complex
Deposited on 1998-08-13, released 1999-01-06
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 3 Å
R-factor: 0.234
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

• Chain '1':
  Compound: DNA (5'-d(*gp*cp*ap*ap*ap*ap*cp*gp*tp*cp*gp*tp*gp*ap*gp*ap*cp*ap*gp*tp*tp*tp* cp*g)-3')
  
• Chain '2':
  Compound: DNA (5'-d(*cp*gp*ap*ap*ap*cp*tp*gp*tp*cp*tp*cp*ap*cp*gp*ap*cp*gp*tp*tp*tp*tp* gp*c)-3')
  
• Chain '3':
  Compound: DNA (5'-d(*gp*cp*ap*ap*ap*ap*cp*gp*tp*cp*gp*tp*gp*ap*gp*ap*cp*ap*gp*tp*tp*tp* cp*g)-3')
  
• Chain '4':
  Compound: DNA (5'-d(*cp*gp*ap*ap*ap*cp*tp*gp*tp*cp*tp*cp*ap*cp*gp*ap*cp*gp*tp*tp*tp*tp* gp*c)-3')
  
• Chain 'A':
  Compound: protein (I-crei)
  Species: Chlamydomonas reinhardtii [TaxId:3055]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P05725 (0-151)
    • see remark 999 (40)
    • see remark 999 (108-109)
  Domains in SCOPe 2.08: d1bp7a_
• Chain 'B':
  Compound: protein (I-crei)
  Species: Chlamydomonas reinhardtii [TaxId:3055]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P05725 (0-151)
    • see remark 999 (40)
    • see remark 999 (108-109)
  Domains in SCOPe 2.08: d1bp7b_
• Chain 'C':
  Compound: protein (I-crei)
  Species: Chlamydomonas reinhardtii [TaxId:3055]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P05725 (0-151)
    • see remark 999 (40)
    • see remark 999 (108-109)
  Domains in SCOPe 2.08: d1bp7c_
• Chain 'D':
  Compound: protein (I-crei)
  Species: Chlamydomonas reinhardtii [TaxId:3055]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P05725 (0-151)
    • see remark 999 (40)
    • see remark 999 (108-109)
  Domains in SCOPe 2.08: d1bp7d_
• Heterogens: CA, HOH

PDB Chain Sequences:

• Chain '1':
  No sequence available.
  
  
• Chain '2':
  No sequence available.
  
  
• Chain '3':
  No sequence available.
  
  
• Chain '4':
  No sequence available.
  
  
• Chain 'A':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >1bp7A (A:)
  ntkynkefllylagfvdgdgsiiaqikpnqsykfkhqlsltfqvtqktqrrwfldklvde
  igvgyvrdrgsvsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdk
  flevctwvdqiaalndsktrkttsetvravld
  

  
  
• Chain 'B':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >1bp7B (B:)
  ntkynkefllylagfvdgdgsiiaqikpnqsykfkhqlsltfqvtqktqrrwfldklvde
  igvgyvrdrgsvsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdk
  flevctwvdqiaalndsktrkttsetvravld
  

  
  
• Chain 'C':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >1bp7C (C:)
  ntkynkefllylagfvdgdgsiiaqikpnqsykfkhqlsltfqvtqktqrrwfldklvde
  igvgyvrdrgsvsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdk
  flevctwvdqiaalndsktrkttsetvravld
  

  
  
• Chain 'D':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >1bp7D (D:)
  ntkynkefllylagfvdgdgsiiaqikpnqsykfkhqlsltfqvtqktqrrwfldklvde
  igvgyvrdrgsvsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdk
  flevctwvdqiaalndsktrkttsetvravld