PDB entry 1biz

View 1biz on RCSB PDB site
Description: hiv-1 integrase core domain
Class: DNA integration
Keywords: DNA integration, integrase, hiv, hydrolase, aspartyl protease, endonuclease
Deposited on 1998-06-21, released 1998-08-19
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-25.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: 0.212
AEROSPACI score: 0.42 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: hiv-1 integrase
    Species: Human immunodeficiency virus 1 [TaxId:11676]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q76353
      • engineered (9)
      • engineered (138)
      • conflict (9)
    Domains in SCOPe 2.08: d1biza_
  • Chain 'B':
    Compound: hiv-1 integrase
    Species: Human immunodeficiency virus 1 [TaxId:11676]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q76353 (Start-165)
      • engineered (138)
    Domains in SCOPe 2.08: d1bizb_
  • Heterogens: CAC, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1bizA (A:)
gshmhgqvdsspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklag
rwpvktvhtdngsnftsttvkaacwwagikqefgipynpqsqgviesmnkelkkiigqvr
dqaehlktavqmavfihnkkrkggiggysagerivdiiatdiqtke

    Sequence, based on observed residues (ATOM records): (download) 
    >1bizA (A:)
vdsspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktv
htdngsnftsttvkaacwwagikqefggviesmnkelkkiigqvrdqaehlktavqmavf
ihnkkrkggiggysagerivdiiatdi

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1bizB (B:)
gshmhgqvdsspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklag
rwpvktvhtdngsnftsttvkaacwwagikqefgipynpqsqgviesmnkelkkiigqvr
dqaehlktavqmavfihnkkrkggiggysagerivdiiatdiqtke

    Sequence, based on observed residues (ATOM records): (download) 
    >1bizB (B:)
pgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdn
gsnftsttvkaacwwagikqefgsmnkelkkiigqvrdqaehlktavqmavfihnkkrkg
giggysagerivdiiatdiqtke