PDB entry 1bdv

View 1bdv on RCSB PDB site
Description: arc fv10 cocrystal
Class: gene regulation/DNA
Keywords: gene-regulating protein, gene regulation/DNA complex
Deposited on 1998-05-11, released 1999-01-06
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.243
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: protein (arc fv10 repressor)
  Species: Enterobacteria phage P22 [TaxId:10754]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P03050
    • engineered (9)
  Domains in SCOPe 2.06: d1bdva_
• Chain 'B':
  Compound: protein (arc fv10 repressor)
  Species: Enterobacteria phage P22 [TaxId:10754]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P03050 (0-52)
    • engineered (9)
  Domains in SCOPe 2.06: d1bdvb_
• Chain 'C':
  Compound: protein (arc fv10 repressor)
  Species: Enterobacteria phage P22 [TaxId:10754]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P03050
    • engineered (9)
  Domains in SCOPe 2.06: d1bdvc_
• Chain 'D':
  Compound: protein (arc fv10 repressor)
  Species: Enterobacteria phage P22 [TaxId:10754]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P03050 (0-End)
    • engineered (9)
  Domains in SCOPe 2.06: d1bdvd_
• Chain 'E':
  Compound: DNA (5'-d(*tp*ap*tp*ap*gp*tp*ap*gp*ap*gp*tp*gp*cp*tp*tp*cp*tp*ap*tp*cp*ap*t)-3')
  
• Chain 'F':
  Compound: DNA (5'-d(*ap*ap*tp*gp*ap*tp*ap*gp*ap*ap*gp*cp*ap*cp*tp*cp*tp*ap*cp*tp*ap*t)-3')
  
• Heterogens: HOH

PDB Chain Sequences:

• Chain 'A':
  Sequence, based on SEQRES records: (download)
  

  >1bdvA (A:)
  mkgmskmpqvnlrwprevldlvrkvaeengrsvnseiyqrvmesfkkegriga
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >1bdvA (A:)
  mpqvnlrwprevldlvrkvaeengrsvnseiyqrvmesfkkegrig
  

  
  
• Chain 'B':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >1bdvB (B:)
  mkgmskmpqvnlrwprevldlvrkvaeengrsvnseiyqrvmesfkkegriga
  

  
  
• Chain 'C':
  Sequence, based on SEQRES records: (download)
  

  >1bdvC (C:)
  mkgmskmpqvnlrwprevldlvrkvaeengrsvnseiyqrvmesfkkegriga
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >1bdvC (C:)
  mpqvnlrwprevldlvrkvaeengrsvnseiyqrvmesfkkeg
  

  
  
• Chain 'D':
  Sequence, based on SEQRES records: (download)
  

  >1bdvD (D:)
  mkgmskmpqvnlrwprevldlvrkvaeengrsvnseiyqrvmesfkkegriga
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >1bdvD (D:)
  mkgmskmpqvnlrwprevldlvrkvaeengrsvnseiyqrvmesfkkegr
  

  
  
• Chain 'E':
  No sequence available.
  
  
• Chain 'F':
  No sequence available.