PDB entry 1bdm
View 1bdm on RCSB PDB site
Description: the structure at 1.8 angstroms resolution of a single site mutant (t189i) of malate dehydrogenase from thermus flavus with increased enzymatic activity
Class: oxidoreductase(nad(a)-choh(d))
Keywords: oxidoreductase(nad(a)-choh(d))
Deposited on
1993-02-16, released
1994-12-20
The last revision prior to the SCOPe 2.08 freeze date was dated
2017-11-29, with a file datestamp of
2017-11-24.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: N/A
AEROSPACI score: 0.36
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: malate dehydrogenase
Species: Thermus thermophilus [TaxId:274]
Database cross-references and differences (RAF-indexed):
- Uniprot P10584 (0-326)
- conflict (74)
- conflict (189)
Domains in SCOPe 2.08: d1bdma1, d1bdma2 - Chain 'B':
Compound: malate dehydrogenase
Species: Thermus thermophilus [TaxId:274]
Database cross-references and differences (RAF-indexed):
- Uniprot P10584 (0-326)
- conflict (74)
- conflict (189)
Domains in SCOPe 2.08: d1bdmb1, d1bdmb2 - Heterogens: NAX, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1bdmA (A:)
mkapvrvavtgaagqigysllfriaagemlgkdqpvilqlleipqamkalegvvmeledc
afpllagleatddpdvafkdadyallvgaaprkagmerrdllqvngkifteqgralaeva
kkdvkvlvvgnpantnaliayknapglnprnftamtrldhnrakaqlakktgtgvdrirr
mtvwgnhssimfpdlfhaevdgrpalelvdmewyekvfiptvaqrgaaiiqargassaas
aanaaiehirdwalgtpegdwvsmavpsqgeygipegivysfpvtakdgayrvveglein
efarkrmeitaqelldemeqvkalgli
Sequence, based on observed residues (ATOM records): (download)
>1bdmA (A:)
mkapvrvavtgaagqigysllfriaagemlgkdqpvilqlleipqamkalegvvmeledc
afpllagleatddpdvafkdadyallvgaaprlqvngkifteqgralaevakkdvkvlvv
gnpantnaliayknapglnprnftamtrldhnrakaqlakktgtgvdrirrmtvwgnhss
imfpdlfhaevdgrpalelvdmewyekvfiptvaqrgaaiiqargassaasaanaaiehi
rdwalgtpegdwvsmavpsqgeygipegivysfpvtakdgayrvvegleinefarkrmei
taqelldemeqvkalgli
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1bdmB (B:)
mkapvrvavtgaagqigysllfriaagemlgkdqpvilqlleipqamkalegvvmeledc
afpllagleatddpdvafkdadyallvgaaprkagmerrdllqvngkifteqgralaeva
kkdvkvlvvgnpantnaliayknapglnprnftamtrldhnrakaqlakktgtgvdrirr
mtvwgnhssimfpdlfhaevdgrpalelvdmewyekvfiptvaqrgaaiiqargassaas
aanaaiehirdwalgtpegdwvsmavpsqgeygipegivysfpvtakdgayrvveglein
efarkrmeitaqelldemeqvkalgli