PDB entry 1bdi

View 1bdi on RCSB PDB site
Description: purine repressor mutant-hypoxanthine-palindromic operator complex
Class: transcription/DNA
Keywords: transcription regulation, DNA-binding, repressor, purine biosynthesis, complex (DNA-binding protein/DNA), transcription/DNA complex
Deposited on 1996-07-25, released 1997-04-21
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 3 Å
R-factor: 0.157
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: protein (purine repressor)
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1bdia1, d1bdia2
  • Chain 'B':
    Compound: DNA (5'-d(*tp*ap*cp*gp*cp*ap*ap*ap*cp*gp*tp*tp*tp*gp*cp*gp*t )-3')
  • Heterogens: HPA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1bdiA (A:)
atikdvakranvstttvshvinktrfvaeetrnavwaaikelhyspsavarslkvnhtks
igllatsseaayfaeiieavekncfqkgytlilgnawnnlekqraylsmmaqkrvdgllv
mcseypepllamleeyrhipmvvmdwgeakadftdavidnafeggymagrylierghrei
gvipgplerntgagrlagfmkameeamikvpeswivqgdfepesgyramqqilsqphrpt
avfcggdimamgalcaademglrvpqdvsligydnvrnaryftpalttihqpkdslgeta
fnmlldrivnkreepqsievhprlierrsvadgpfrdyrr

    Sequence, based on observed residues (ATOM records): (download) 
    >1bdiA (A:)
tikdvakranvstttvshvinktrfvaeetrnavwaaikelhyspsavarslkvnhtksi
gllatsseaayfaeiieavekncfqkgytlilgnawnnlekqraylsmmaqkrvdgllvm
cseypepllamleeyrhipmvvmdwgeakadftdavidnafeggymagrylierghreig
vipgplerntgagrlagfmkameeamikvpeswivqgdfepesgyramqqilsqphrpta
vfcggdimamgalcaademglrvpqdvsligydnvrnaryftpalttihqpkdslgetaf
nmlldrivnkreepqsievhprlierrsvadgpfrdyr

  • Chain 'B':
    No sequence available.